Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0486 |
Symbol | |
ID | 4808339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 599442 |
End bp | 600653 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640105900 |
Product | GTP-binding signal recognition particle |
Protein accession | YP_001036917 |
Protein GI | 125973007 |
COG category | [N] Cell motility |
COG ID | [COG1419] Flagellar GTP-binding protein |
TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA GAAGATACAT TGGAAAAGAT ACTCAGGAAG CTTTGTTAAA AGTAAAAATG GATCTTGGCA GTGACGCCAT AATATTAAAC ACCAGAAAGA TAAGGCAGAA AGGTTTTTTC AAAATGTTTT CAAAACCTTT GGTTGAGGTT CTGGCTTCCG TGGATGACAA TTATGGTACA AATTCCAGAA GAACAGCTTA TGAAAGCAGA GGAAAAAATG ACAGAGGATA TGATGTCGTA TCAGGTGGTA ATTTGAGTTA TAATGAAAAT TTAAGAAGTA AATTTGACGA AAAAGAGGAA AAAATACATC TTTTAGAGAA TAAAATAATT GGCATGGAGG AGAAAATCAA TAAGATTTAT GAGCAAATCC AAAAACCTTC TGAAAAGCTG ATTGCTGCGA CAAATGATGA TAATGAGCAG CCGCAGTCCA AAGTTCTTGA TCTGTTTTAC AACAATCTGT TGAAAAATGA AGTGGATACT GAGATAGTAA AACAGCTTAT CAGTGTTGTG AGAGGAAAGG TAAAAGAAAA TGTAAGTGTC AGTGAAACTG CATCAATACT CTACAACCTT ATTTCGGAAA TGATGGGCAA ACCTTCGGAT ATAAAGCTGA GGAATGACGG CAAGCCGACG GTAGTGATGC TGGTAGGGCC GACCGGTGTG GGTAAAACCA CCACTTTGGC GAAGATTGCC GCAAATTATT CATTGAATCT CAACAAAAAT GTCGGATTGA TTACTGCCGA CACATATCGT ATCGCAGCCG TGGAGCAGCT TAAAACTTAC GCAGATATAC TGGGAATGCC TCTTAAAGTT ATATATTCGG CCAATGAAAT TCAAGATGCA ATAAAAGAAT ACAGTGATAA AGATTTGATA CTTATTGACA CTGCGGGAAG AAGTTATAAA AACAAAGAAC ATTTTGACGA GCTTAAGACA CTGGTCGAGG TAACCAATGC CGATGAAATT TATCTGGTGT TAAGTACTAC GACAGGTATG AGAAACTGCA GGGAAATCAT TGAACACTAT AGCTTTTTGG AAAACTACAA ACTTATCTTT ACAAAACTGG ATGAAAGTTC AGCGTTAGGG CTTATACTTA ATTCAAGACG CCTGACCAAT AGGGATTTAT CATTTGTCAC AACCGGACAG AGTGTGCCGG ATGATATTGA GCTTGCGAAT GTTGACATGA TAACAAAAAA TTTGTTGGGG AGCATTTCGT AG
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Protein sequence | MKIRRYIGKD TQEALLKVKM DLGSDAIILN TRKIRQKGFF KMFSKPLVEV LASVDDNYGT NSRRTAYESR GKNDRGYDVV SGGNLSYNEN LRSKFDEKEE KIHLLENKII GMEEKINKIY EQIQKPSEKL IAATNDDNEQ PQSKVLDLFY NNLLKNEVDT EIVKQLISVV RGKVKENVSV SETASILYNL ISEMMGKPSD IKLRNDGKPT VVMLVGPTGV GKTTTLAKIA ANYSLNLNKN VGLITADTYR IAAVEQLKTY ADILGMPLKV IYSANEIQDA IKEYSDKDLI LIDTAGRSYK NKEHFDELKT LVEVTNADEI YLVLSTTTGM RNCREIIEHY SFLENYKLIF TKLDESSALG LILNSRRLTN RDLSFVTTGQ SVPDDIELAN VDMITKNLLG SIS
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