| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0483 |
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| Symbol | fliR |
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| ID | 4808336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 595409 |
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| End bp | 596194 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640105897 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001036914 |
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| Protein GI | 125973004 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0146503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTTGTTT TGGAAGGAAT TTTGCATGTT GATATAGAAG TATTTATGTT AATATTCGTT
AGAATGACAG GTCTGTTCGT AATAGCTCCC ATTTTTGGCT CAAGGAATAT TCCGACATAT
TGCAAAATAG GGTTTTCATT CATGACGGCA TTGATACTTG TAAATACCAT AAAAGTTCAG
GAGCTTTATT TTAGCAATAT TTACGAATAT TTTATCCTTG TTTTGAAAGA GTTTTTGGTG
GGAATTACCT TAGGTTATGT GGCATATATG ATTTTCACGG CTATTTATGT TGCGGGGCAG
TTTATAGACA TGCAGATTGG GTTTGGAGTG GTAAATGTAA TTGACCCCTT GAACAGTACA
CAGGTATCTA TTACGTCAAA CTTTTATTTC CTGCTGTGCA TGCTGGTTTT CCTGATTTGC
AGGGGCCATT ATATATTGAT AAGAGCATTG TTTGCCAGTT ACAATTATAT ACCCGTGGGA
ACCGGTGTGT TTGGAGAGGA TATGGTAAAT GATATAGTAA GGGTTTTTGG AAACATATTT
CTGATTGCTT TCAAAATCAG TGCACCTATT ACCATATCAA TAATGATAAG CGAGGTGGCA
CTGGGAATTG TTTCAAAAAC AGTACCGCAG CTTAATGTAT TTATGGTGGG AATGCCTCTT
AAGATTATTC TGGGATTGGC TGTGATGGTT ATTACAATAC CGATGTTTTT AAACCTTGTT
GAAAACCTGA TAACGGGTAT AGACAATGAA ATGCACATTT TTCTCAAGGA TATGGCACCA
AAATGA
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| Protein sequence | MFVLEGILHV DIEVFMLIFV RMTGLFVIAP IFGSRNIPTY CKIGFSFMTA LILVNTIKVQ
ELYFSNIYEY FILVLKEFLV GITLGYVAYM IFTAIYVAGQ FIDMQIGFGV VNVIDPLNST
QVSITSNFYF LLCMLVFLIC RGHYILIRAL FASYNYIPVG TGVFGEDMVN DIVRVFGNIF
LIAFKISAPI TISIMISEVA LGIVSKTVPQ LNVFMVGMPL KIILGLAVMV ITIPMFLNLV
ENLITGIDNE MHIFLKDMAP K
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