| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0481 |
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| Symbol | fliP |
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| ID | 4808334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 594275 |
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| End bp | 595057 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640105895 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_001036912 |
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| Protein GI | 125973002 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000846074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTA GGCTAAAATA TCTTGGGATT ATTTTATTAA CAATAACAGT ATTTATGTTA
ATAACGTCAA ATGTTTATGC AGAGCCTGAC TCAATAGCTT TGCCAAAACT AGGCTTTACG
GTGGAACCTT CCGACAATCC CCAGGATGTT TCGACCACTA TTCAGATAAT TGTGCTTTTA
ACGATTCTGT CATTGGCTCC ATCTATATTA ATTATGATGA CAAGTTTTGT CAGAATAATC
ATCGTGCTTT CCTTTTTCAG GAACGCGATT GGAACCCAAC AAATGCCGCC GAATCAAGTT
TTGATTGGGC TAGCTTTGTT TTTAACCCTG TTTATCATGA GGCCTGTATT AACGGAGATA
AATGAAACTG CTTTTAAGCC TTACACAAAT CAGGAAATTA CTCAGGAAGT TGCTTTGGAA
AGGTCTTCGG ATATTATCAA AAGGTTCATG CTAAAGCAAA CATCCAAAAA TGATCTCGGT
CTTTTCGTAT CGCTTTCCGG CATGGAAACA CCCATAAAAG AAGAAGACAT TCCAAAACTT
CCGTTAACCA TAGTTATTCC GGCGTTTATA ATAAGTGAGC TGACAATAGC TTTTAAAATA
GGTTTTTTAA TATATATACC GTTTCTGGTA ATTGACATGG TGGTTTCAAG TACTCTTATG
TCCATGGGTA TGATGATGCT TCCTCCTGTA ATGATATCTC TTCCTTTCAA GATATTGCTG
TTCATCATGG TGGGAGGATG GAATCTTATG ACGCAGATGA TAGTAAACAG TTTTGTTACA
TAG
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| Protein sequence | MKTRLKYLGI ILLTITVFML ITSNVYAEPD SIALPKLGFT VEPSDNPQDV STTIQIIVLL
TILSLAPSIL IMMTSFVRII IVLSFFRNAI GTQQMPPNQV LIGLALFLTL FIMRPVLTEI
NETAFKPYTN QEITQEVALE RSSDIIKRFM LKQTSKNDLG LFVSLSGMET PIKEEDIPKL
PLTIVIPAFI ISELTIAFKI GFLIYIPFLV IDMVVSSTLM SMGMMMLPPV MISLPFKILL
FIMVGGWNLM TQMIVNSFVT
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