| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0474 |
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| Symbol | |
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| ID | 4808327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 588682 |
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| End bp | 590004 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640105888 |
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| Product | protein of unknown function DUF1078-like protein |
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| Protein accession | YP_001036905 |
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| Protein GI | 125972995 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000090236 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGAT CCATGTTTTC CGGAGTTTCA GGACTTCAGG CCCATCAGAC AAAAATGGAC
GTTATAGGAA ACAATGTGGC AAACGTTAAC ACCGTAGGTT TTAAATCAAG CAGGGTGACG
TTCCAGGAAG TTTTCAGCCA GACTTTAAAA GGAGCCAGCT CTCCTGATCC AACTACCGGG
AGAGGAGGAA CTAATCCCAT GCAGGTGGGA TTGGGTCTGG GAGTTGCAAC CATTGACACA
CTCATGACTC GCGGAAGTGT TCAAAGAACC GATAATCCTA CCGACCTTGC AATTGAAGGA
GACGGATTCT TTATTGTAAA AGGCGGAAGC AGTGACACAT TCAAATTCAC AAGAGCCGGA
AACTTCGGAA TAGACAGACT GGGAAACCTT GTAACCGGAA GCGGACTGAA TGTTTATGGC
TGGCAGTCCT ATACGAAACT GCCTGACGGA ACCTATAAAT TTGACACTGA AAGTCAAATT
GAACCTATAA ATCTTTATTC CGACGATGTG AATAAAAATA AAAGAATGAT AGCAGCAAAA
GCAACTACTT ATGCAATCTT TGAAGGAAAT CTGGATGCAT CCTATTCAAT TTACAGCAGC
GCAGCATCCG GCACATCCAG CAACAATAGA TTCACTATGC CTGTTACGGT ATATGATTCT
TTGGGAAACA GCTACAAAAT AAATATAAGT TTCTGGAAAA CCGACGTTAC AGGCGGTGTT
ACCACATGGA CATGGCAGGT TGATTCGGGA AATGGGGTAA CAGCATCGGG AGCTACCGGA
ACTATACTGT TTGACGATCA GGGACAGGTA ATTGAAAGTT CCGCGGTTAC ACCCAGTATA
ACAATTATAC CTGACAGCAG CGTTGGAAGC CAGAATATCA ATGTGAAGCT GGACTTTTCC
AGACTTACAA TGTATGCGGC AGACAGTTCC GCAAAAGCTA CAAATGTGGA CGGATATCCG
GCAGGTTCGC TTGTGACCTT CAGTATTGGT TCCGACGGAA TGATTATGGG TATATACAGT
AATGGTCAGC AGCAGCCGTT GGGACTTATA GCCTTGGCAA GTTTTGACAA CCCTGCGGGT
CTTGAAAAGG TAGGAGAGAA TATGTATATT CCGACTTCCA ACTCCGGAGA GTTTAAAAAA
GGTGTCAAGG CAGGCACTGA AGGAGTGGGA ACTTTAAGCC CCGGTACGTT GGAAATGTCC
AACGTGGATC TGTCAAAAGA GTTTACTGAA ATGATTATTA CCCAAAGAGG ATTTCAGGCA
AACAGCAGGA TAATAACAAC TTCCGACGAA ATGCTCCAGG AGCTTGTCAA CCTTAAGAGA
TAG
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| Protein sequence | MMRSMFSGVS GLQAHQTKMD VIGNNVANVN TVGFKSSRVT FQEVFSQTLK GASSPDPTTG
RGGTNPMQVG LGLGVATIDT LMTRGSVQRT DNPTDLAIEG DGFFIVKGGS SDTFKFTRAG
NFGIDRLGNL VTGSGLNVYG WQSYTKLPDG TYKFDTESQI EPINLYSDDV NKNKRMIAAK
ATTYAIFEGN LDASYSIYSS AASGTSSNNR FTMPVTVYDS LGNSYKINIS FWKTDVTGGV
TTWTWQVDSG NGVTASGATG TILFDDQGQV IESSAVTPSI TIIPDSSVGS QNINVKLDFS
RLTMYAADSS AKATNVDGYP AGSLVTFSIG SDGMIMGIYS NGQQQPLGLI ALASFDNPAG
LEKVGENMYI PTSNSGEFKK GVKAGTEGVG TLSPGTLEMS NVDLSKEFTE MIITQRGFQA
NSRIITTSDE MLQELVNLKR
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