Gene Cthe_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0464 
Symbol 
ID4808392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp578918 
End bp579232 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content36% 
IMG OID640105878 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001036895 
Protein GI125972985 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAA ACGGTATTAA TTTAGTAACT CCTTCGGTAT CAGGAATTGA TTTTACGGTA 
GGGAATACGA TAAGTAATAA AAATGAAAAT GTTGTTCAGT CTTTCAGTGA TTATTTGAAA
AACGCCATAA AACAGGTGGA TGAGCTTGAA AAACAGTCAA AGGCTGTTGC GGAGGATTTT
GCGGCAGGCA AAACCGACAA TATCCATGAG GTTATGATTG CCGCCCAAAA GGCAGATATA
GCTATTCAAT TTACATTGCA AATCAGGAAC AAAATTTTGG ATGCTTATAA TGAAATAATG
AGAATGCAGA TCTAA
 
Protein sequence
MAVNGINLVT PSVSGIDFTV GNTISNKNEN VVQSFSDYLK NAIKQVDELE KQSKAVAEDF 
AAGKTDNIHE VMIAAQKADI AIQFTLQIRN KILDAYNEIM RMQI