| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0447 |
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| Symbol | |
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| ID | 4808375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 562463 |
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| End bp | 563197 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640105861 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_001036878 |
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| Protein GI | 125972968 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000743913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTTT TAAAGAAGCT GAAACTTTCT TTAATGGTTG GGTATATTAA CTTACTTAAC
AAACTGAAGC TTTACAACAA TTATCCTGTT TACTACATTG GGGGAAGTGA GGCTCTTCCG
CCGCCGCTTA CCAACGATGA GGAAAATTAT CTTTTAAGCA AGCTTGAGAA AAGGGATTTT
GGGGTAAAGT CAATTTTGAT TGAAAGGAAT TTAAGACTTG TGGTTTATAT TGCAAGAAAA
TTTGAGAATA CCGGAGTGGG GGTTGAAGAC CTTGTTTCCA TTGGCACCAT TGGACTTATC
AAGGCAATTA ACACATTTGA CCCCAATAAA AATATAAAAC TTGCCACATA TGCATCAAGG
TGTATTGAAA ATGAGATACT TATGTACCTT AGGAGAAACA ACAGAATGAA GACAGAAATC
TCAATAGATG AGCCGCTGAA TGTGGATTGG GACGGGAATG AATTGCTTCT TTCAGATATT
CTTGGAACGG AAAATGACCT TATCCACAGG AGTATTGAGG ACGAGATAGA CAAAGAGCTT
CTTGCCATGG CAATGAAAAA GCTGTCTGTC AGGGAAAAGA AGATAATGGA GCTTCGATTT
GGTCTTACAA ACGGCGGAGT TGAAAAAACG CAGAAGGAAG TTGCCGATAT GCTTGGTATT
TCCCAGTCGT ACATTTCCAG ACTGGAAAAG AAGATTATCA GTAGGCTTAG AAAAGAGATA
AGCAGAATGG TTTGA
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| Protein sequence | MFFLKKLKLS LMVGYINLLN KLKLYNNYPV YYIGGSEALP PPLTNDEENY LLSKLEKRDF
GVKSILIERN LRLVVYIARK FENTGVGVED LVSIGTIGLI KAINTFDPNK NIKLATYASR
CIENEILMYL RRNNRMKTEI SIDEPLNVDW DGNELLLSDI LGTENDLIHR SIEDEIDKEL
LAMAMKKLSV REKKIMELRF GLTNGGVEKT QKEVADMLGI SQSYISRLEK KIISRLRKEI
SRMV
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