Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0422 |
Symbol | |
ID | 4808425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 530687 |
End bp | 531370 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640105836 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_001036853 |
Protein GI | 125972943 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATC CGAAAGCTAT CTCAAAACAG ACTCTTTTAA GATTACCTTC ATATTTAAGT TACTTAAAAT CGCTGCCAAA GCAGGACGGT GAATATGTAT CGGCTACAAT GATTGCTTCG GCGCTGGGAC TGAATGATGT GCAAGTTCGA AAGGATCTGG CCTGTGTAAG CAAAAAAGGC CGTCCAAAGC TTGGATATGT TGCTGAAGAG TTGATAAGGG ATATAGAGAG TTTTCTTGGG TATGACTCTT TGAACGATGC GATAATTGTG GGCGCGGGAA GGCTTGGAGG AGCTCTTTTA TCCTATGAGG GCTTTAAAGA ATATGGATTA AATATTGTTG CAGCGTTTGA TATTGATGAA AGTAAAATCG GCACTGAAAT TTGCGGGAGA AAAATTTTCC CTTTGGACAA AATGAAGGAA CTGTGCCGGC GGATGAAAAT TCGTATCGGT ATAATAACCG TCCCTGCAGA TTCAGCCCAA AAAGTATGCG ACATGCTTGT AGACAGCGGA ATATATGCAA TATGGAATTT TGCACCTGTT CACCTTAAAG TACCGGATAA CATTTTAGTC CAGCAAGAAA ACATGGCGGC ATCACTGGCT GTACTTTCCG CACACTTGGC AGAAGCAATA AAGAATAATG GAATCGGAAA AGGAGATGAG GAAAATGACG AAAATAGCGA ATAA
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Protein sequence | MNNPKAISKQ TLLRLPSYLS YLKSLPKQDG EYVSATMIAS ALGLNDVQVR KDLACVSKKG RPKLGYVAEE LIRDIESFLG YDSLNDAIIV GAGRLGGALL SYEGFKEYGL NIVAAFDIDE SKIGTEICGR KIFPLDKMKE LCRRMKIRIG IITVPADSAQ KVCDMLVDSG IYAIWNFAPV HLKVPDNILV QQENMAASLA VLSAHLAEAI KNNGIGKGDE ENDENSE
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