Gene Cthe_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0419 
Symbol 
ID4808422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp527446 
End bp528705 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content37% 
IMG OID640105833 
Productpeptidase M16-like protein 
Protein accessionYP_001036850 
Protein GI125972940 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAC GTATAAAATT AGAAAACGGT GTCAGAGTTG TTTGCGAAAA AATTCCCTAT 
CTCAGATCTG TTTCTATCGG TATCTGGGTT GGAACCGGTT CAAGGAATGA AAGCCAATCA
AACAACGGAA TATCTCACTT TATTGAACAT ATGCTTTTTA AAGGGACTGA CAACAGAAGT
GCCCGGGAGA TTGCCGACAG CATTGACAGC ATTGGGGGTC AACTTAATGC GTTTACAGGA
AAGGAATGTA CCTGTTATTA TACAAAGACT TTGGATTCCC ATGCTGATAT TGCCTTGGAC
GTTCTTTCGG ATATGTTTTT TAATTCAAGG TTTGAAGAAA AAGATATAGA AGTTGAAAAG
AAAGTTATTT TGGAAGAAAT AGGCATGTAT GAGGATTCTC CGGAGGAGCT GGTGCATGAT
ATCCTGTCTG AAACCGTATG GGAGGATAAT TCACTTGGAC TTCCCATTTT GGGAACACGG
GAAACCCTTT TGAATATCAA CAAAGATAAA ATCAAAGCTT ACATTAATGA GAGATATTTG
CCGCAGAATA CGGTTATAGC TGTGGCCGGG AATTTTGAAG AGGACAGAAT AATTGATGTT
ATAAAAGAAA AATTCGGCGG ATGGAATGCC AGCGGAAAAG ACAGTAAAAC TATTGAAGAT
GCAAAGTTTA AGGTGAATTC CAAAATCAAG GTGAAAGATA CGGAACAAAT ACACATATGT
ATGGGATTTG AAGGAGTTGC GCACGGAAGT GATGAGTTGT ATCCTCTGCT TGCCGTAAAC
AATGTATTGG GCGGCGGAAT GAGCTCCAGA ATGTTTCAGA AAATCAGGGA AGAAAAAGGA
TTGGTGTATT CCATATACTC ATACCCGTCA TCTTATAAAA ATGCCGGTTT GTTTACGATA
TATGCAGGAA TGAATGCAGA GCATTTGGAA AAGGTTGTGG AGCTTATAAT AAAAGAAATA
AAGATACTTT TAAAAGAAGG ACTTTCTAAG GATGAACTTG AAAAATCCAA AGAACAGCTT
AAGGGAAGCT ATATACTCGG ACTTGAGAGT ACCAGCAGCA GAATGAACAG TATGGGAAAA
TCGGAAGTAC TTATGGACAG AATATATACT CCGGATGAGA TATTAAAGAA GATTGATGCG
GTAAATCAAG AAAGTGTTGA ACGGGTTATA AAACAAATTT TTTGTTTGGA TAAAATCAGT
TTTGCGATAG TGGGTAACAT AAAAAAGGAA ATAGATATTA GAAAAATAAT TAATGCTTAA
 
Protein sequence
MYKRIKLENG VRVVCEKIPY LRSVSIGIWV GTGSRNESQS NNGISHFIEH MLFKGTDNRS 
AREIADSIDS IGGQLNAFTG KECTCYYTKT LDSHADIALD VLSDMFFNSR FEEKDIEVEK
KVILEEIGMY EDSPEELVHD ILSETVWEDN SLGLPILGTR ETLLNINKDK IKAYINERYL
PQNTVIAVAG NFEEDRIIDV IKEKFGGWNA SGKDSKTIED AKFKVNSKIK VKDTEQIHIC
MGFEGVAHGS DELYPLLAVN NVLGGGMSSR MFQKIREEKG LVYSIYSYPS SYKNAGLFTI
YAGMNAEHLE KVVELIIKEI KILLKEGLSK DELEKSKEQL KGSYILGLES TSSRMNSMGK
SEVLMDRIYT PDEILKKIDA VNQESVERVI KQIFCLDKIS FAIVGNIKKE IDIRKIINA