Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0389 |
Symbol | |
ID | 4808466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 483719 |
End bp | 484690 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640105803 |
Product | PfkB |
Protein accession | YP_001036820 |
Protein GI | 125972910 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.211683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATG TTGTTGCGGT TGGAGAGTTG TTAATAGATT TTTTGCCCGC TGGTACAAAT GAAAATGGGA TGCCTCTTTT TTCGTCGAAC CCTGGCGGAG CTCCGGCCAA CGTTCTTGCC ATGCTGTCCA AACTGGGAGC CAAAACTGCT TTTATCGGGA AAGTCGGAAA AGACGGGTTT GGACAGTTTT TGAAGGCGAC GCTTGATAAT GCCGGAATTG ATACATCCAA CCTGTTGATG AGTTCCAGCG AAATGACAAC TTTGGCATTT GTTCATCTGA ATGAGAAGGG TGACAGATCT TTTAGTTTTT ATCGAAAGCA TTGTGCGGAT GTCAGTTTGG ACGCCGGCGA ACTTGATAAA GATTTGCTCA GAACATGCCA TTTTCTGCAT TTTGGGGCTG TCTCTTTAAC TGATGAGCCG AGTCGTACTG CGACTTTGGA AGCCGCCAGA ATTGCAAAAG AAGCAGGAGC AATAATTTCA TATGACCCGA ATTACCGGCC TGCTTTGTGG AGTAATGAAC ACGAAGCACG TAAATACATG TTAAAGGCAG TTGAATATGC TGATTTGGTT AAAGTCAGTG AAGAAGAACT TTGGCTTTTG GCGGAAAGTG AGGATTTTTC CAAAGGGGCG CACAAACTGC TTGCCATGGG TCCGTCGGTT GTCTTTGTTA CTTGTGGTGA AAAAGGCTCT TATGTTTTCA CCGGAAGTTG TAAGGCGAAT CACTGTGGAT ACGACGTAAA AGTGGTTGAT ACTACCGGGG CGGGAGATGC GTTTGTGGGA GCCATGCTAT GGCAGCTTAG GGGTATGTCT TTGGAAGAAA TATCTCAGAT ATGTGAGCAA AAATGGGGAG AATTACTGGC ATTTTCAAAT GCTGCAGGTA CTATTGTGGC TACTAAAAAA GGTGCAATTC CTGCAATGCC CGACCTGGAT ACGATAAATA CTTTTATGAG GCAGTTTCTT GAAGAGAAGT AA
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Protein sequence | MFDVVAVGEL LIDFLPAGTN ENGMPLFSSN PGGAPANVLA MLSKLGAKTA FIGKVGKDGF GQFLKATLDN AGIDTSNLLM SSSEMTTLAF VHLNEKGDRS FSFYRKHCAD VSLDAGELDK DLLRTCHFLH FGAVSLTDEP SRTATLEAAR IAKEAGAIIS YDPNYRPALW SNEHEARKYM LKAVEYADLV KVSEEELWLL AESEDFSKGA HKLLAMGPSV VFVTCGEKGS YVFTGSCKAN HCGYDVKVVD TTGAGDAFVG AMLWQLRGMS LEEISQICEQ KWGELLAFSN AAGTIVATKK GAIPAMPDLD TINTFMRQFL EEK
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