Gene Cthe_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0377 
Symbol 
ID4808454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp473797 
End bp474705 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content38% 
IMG OID640105791 
Productpeptidase M56, BlaR1 
Protein accessionYP_001036808 
Protein GI125972898 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTTCGG AAATGTTTTA TTGGCTTTTT AACATGAGTA TATCGGCGTC TGTTGCAGGT 
ATTGTTGTTC TGCTTTTAAG GAGAATAAAA AAGCTGCCGA GGCGTCTGGT ACATATACTA
TGGGTAATTC CTTTTATCAG AATGTGGATT CCGGTGGGGA TTCGAAGTAA ATACAGTTTA
ATGACTTTGA TTTCAAAGTT TACTACAAAA AGTGTAGTTC TGTATGACGG AACTTTGGAT
TTTAGTTTTA CAAACTATAT TATGGCTGCA GACAATTACT TTCCTGTTAC CTATAAGGAA
GATATGCTTG AAAACTTATT CAGTATTGCA TCGGTAGTTT GGATTATTGT TGCTGTTGCT
CTGTCATTGA TTTTCGCAAT ACTTTATGTT CTTGCAAAAT CTGAGTTGAA AGATGCCTCT
CTTTTACGGG ATAATATTTA TGTTTCAGAC AAAATAACTT CACCGGCTGC ATACGGTGTT
TTCCGTCCTA AGATTGTTGT TCCCAAAGGT TATGAGTTAC GAAATCTACA TTATATTGTG
GCCCATGAAT CGGCCCATAT TTACCGCAAG GATAATCTGT GGCGTATCAT TGCCGTTATC
TCTGCTTCTG TTCATTGGTT CAATCCTTTG ATTTGGTTGT TTTTAAAAAA GTTTTTGGAA
GATACGGAAC TTGCCTGTGA TGAGCAGGTG TTGGCGAATT GTGGCGAAGA TGAGAAGAAA
GCTTATGCAA TGGCTCTTGT TGATTGTGCG GAAAGCATGG GTGTTTTTGC CTCACCGTTC
GGTGGAGCAA AAATACGGGT GCGTATTGAC CGTATTTTGT CTTACAGGAA GCTGTCAATT
ATTTCGATTG CAAGTTTGAC GGCATTTGCT GTTGCAATAG GGTATGTGCT TTTAACGAAT
GCTTCTTAA
 
Protein sequence
MLSEMFYWLF NMSISASVAG IVVLLLRRIK KLPRRLVHIL WVIPFIRMWI PVGIRSKYSL 
MTLISKFTTK SVVLYDGTLD FSFTNYIMAA DNYFPVTYKE DMLENLFSIA SVVWIIVAVA
LSLIFAILYV LAKSELKDAS LLRDNIYVSD KITSPAAYGV FRPKIVVPKG YELRNLHYIV
AHESAHIYRK DNLWRIIAVI SASVHWFNPL IWLFLKKFLE DTELACDEQV LANCGEDEKK
AYAMALVDCA ESMGVFASPF GGAKIRVRID RILSYRKLSI ISIASLTAFA VAIGYVLLTN
AS