| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0342 |
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| Symbol | |
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| ID | 4808491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 430223 |
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| End bp | 431971 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640105756 |
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| Product | hydrogenase, Fe-only |
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| Protein accession | YP_001036773 |
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| Protein GI | 125972863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATGG TAAATGTTAC TATAGATAAT TGCAAGATAC AGGTACCTGC CAATTATACC
GTGTTGGAAG CTGCAAAACA GGCTAACATA GACATACCTA CTCTTTGCTT CCTCAAGGAT
ATAAATGAAG TAGGTGCCTG CCGTATGTGC GTTGTTGAGG TAAAAGGTGC CAGAAGCTTA
CAGGCGGCCT GTGTATATCC GGTGTCCGAA GGTCTTGAGG TGTACACTCA GACACCGGCG
GTAAGGGAAG CCAGGAAAGT GACTTTGGAA CTTATACTGT CAAACCATGA AAAGAAATGT
TTGACCTGTG TAAGAAGTGA AAACTGCGAA TTGCAAAGAC TGGCAAAAGA TCTGAATGTA
AAAGATATCA GATTTGAAGG TGAAATGAGC AATTTGCCGA TAGATGATCT TTCGCCTTCT
GTTGTAAGGG ATCCCAACAA GTGTGTTTTG TGCAGACGCT GTGTCAGCAT GTGCAAGAAT
GTTCAGACCG TTGGAGCCAT TGATGTTACT GAAAGAGGAT TCCGTACCAC CGTATCAACG
GCCTTTAACA AACCTCTCAG TGAAGTACCC TGCGTAAACT GCGGACAGTG TATCAATGTA
TGTCCTGTGG GAGCATTGAG AGAAAAGGAC GATATTGACA AGGTTTGGGA AGCTCTTGCA
AATCCTGAGC TTCATGTAGT CGTTCAGACG GCTCCTGCAG TCAGGGTTGC ATTGGGAGAA
GAGTTTGGAA TGCCTATCGG CTCAAGAGTG ACCGGTAAAA TGGTGGCAGC ATTGAGTCGA
CTGGGCTTTA AAAAGGTATT TGATACAGAT ACGGCTGCCG ACCTTACAAT AATGGAGGAA
GGTACTGAGC TTATAAACAG GATTAAAAAC GGCGGCAAGC TTCCTTTGAT AACTTCCTGC
AGCCCGGGAT GGATAAAGTT CTGCGAACAC AACTATCCTG AGTTTTTAGA CAATCTGTCC
AGCTGCAAAT CGCCTCACGA AATGTTTGGT GCGGTTTTGA AATCCTACTA TGCACAGAAA
AACGGAATTG ATCCTTCAAA AGTATTTGTT GTATCAATAA TGCCATGTAC GGCAAAGAAG
TTTGAGGCTC AAAGGCCGGA GCTTTCTTCA ACGGGTTATC CTGATGTGGA TGTTGTTCTT
ACCACAAGAG AGCTTGCAAG AATGATAAAA GAAACGGGTA TTGATTTTAA TTCCCTTCCG
GATAAACAGT TTGATGATCC TATGGGTGAG GCATCCGGAG CAGGTGTTAT TTTTGGTGCC
ACCGGAGGAG TTATGGAGGC TGCCATCAGG ACCGTCGGTG AATTATTGAG CGGCAAACCT
GCAGACAAGA TTGAATATAC TGAGGTAAGA GGTCTTGACG GTATAAAAGA GGCTTCCATA
GAACTTGACG GTTTTACTCT GAAGGCTGCT GTTGCCCATG GTCTTGGCAA CGCAAGAAAG
CTTCTTGACA AAATAAAAGC CGGAGAGGCG GATTATCATT TCATTGAAAT AATGGCCTGT
CCCGGTGGTT GTATAAACGG TGGAGGACAG CCCATACAGC CGTCATCTGT GAGAAACTGG
AAAGATATAA GATGCGAGAG GGCGAAAGCT ATTTACGAAG AGGATGAGTC CTTGCCTATA
AGAAAATCTC ATGAAAATCC AAAGATAAAG ATGCTGTATG AAGAATTCTT TGGTGAACCG
GGCAGTCATA AAGCTCACGA GCTTTTGCAC ACTCATTATG AGAAGAGGGA AAACTACCCT
GTTAAATGA
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| Protein sequence | MQMVNVTIDN CKIQVPANYT VLEAAKQANI DIPTLCFLKD INEVGACRMC VVEVKGARSL
QAACVYPVSE GLEVYTQTPA VREARKVTLE LILSNHEKKC LTCVRSENCE LQRLAKDLNV
KDIRFEGEMS NLPIDDLSPS VVRDPNKCVL CRRCVSMCKN VQTVGAIDVT ERGFRTTVST
AFNKPLSEVP CVNCGQCINV CPVGALREKD DIDKVWEALA NPELHVVVQT APAVRVALGE
EFGMPIGSRV TGKMVAALSR LGFKKVFDTD TAADLTIMEE GTELINRIKN GGKLPLITSC
SPGWIKFCEH NYPEFLDNLS SCKSPHEMFG AVLKSYYAQK NGIDPSKVFV VSIMPCTAKK
FEAQRPELSS TGYPDVDVVL TTRELARMIK ETGIDFNSLP DKQFDDPMGE ASGAGVIFGA
TGGVMEAAIR TVGELLSGKP ADKIEYTEVR GLDGIKEASI ELDGFTLKAA VAHGLGNARK
LLDKIKAGEA DYHFIEIMAC PGGCINGGGQ PIQPSSVRNW KDIRCERAKA IYEEDESLPI
RKSHENPKIK MLYEEFFGEP GSHKAHELLH THYEKRENYP VK
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