Gene Cthe_0338 details

Gene Information

• Locus tag: Cthe_0338
• ID: 4808487
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 426965
• End bp: 427462
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640105752
• Product: NADH-quinone oxidoreductase, E subunit
• Protein accession: YP_001036769
• Protein GI: 125972859
• COG category: [C] Energy production and conversion
• COG ID: [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit
• TIGRFAM ID: [TIGR01958] NADH-quinone oxidoreductase, E subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000113802
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAA ATGGTTGCTG CTGTTGCGGC GGAGTAGACT CCAGAGAACA AAAACTTAAC 
GAAATAATTG AAAAATACAA AAACACAAAA GGAGCGCTTG TTCCTGTTCT TCATGAAGCA 
CAGGAAGTAT ATGGTTATTT GCCTCTGGAG GTTCAGAAAA AAATTGCTGA AGGGCTTAAC 
ATACCTTTGG CTGAAGTTTA CGGTGTTGTA ACATTCTATA CCCAGTTTTC CTTGAATCCA 
AAAGGAAAAT ATAAAATCCA GGTTTGCATG GGTACTGCAT GTTATGTAAA AGGATCCGGA 
GCTATTTTGG AAAAGCTTAA AGAAAAGCTT GAGATTGATG TTGGCGAATG CACCAGTGAC 
GGCAAGTTTT CTTTGGAAGC TTGCAGATGT ATAGGAGCTT GTGGATTGGC CCCGGTAATA 
ATGATTAACG ACGATGTATA CGGCAGACTT GTACCTGATG ATATAGAAGG GATAATTGAA 
AAGTATAAGA AAGAATGA 

 

Protein sequence

MSANGCCCCG GVDSREQKLN EIIEKYKNTK GALVPVLHEA QEVYGYLPLE VQKKIAEGLN 
IPLAEVYGVV TFYTQFSLNP KGKYKIQVCM GTACYVKGSG AILEKLKEKL EIDVGECTSD 
GKFSLEACRC IGACGLAPVI MINDDVYGRL VPDDIEGIIE KYKKE