Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0317 |
Symbol | |
ID | 4808535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 400705 |
End bp | 401376 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640105728 |
Product | hypothetical protein |
Protein accession | YP_001036748 |
Protein GI | 125972838 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000861184 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTCGTT TTAGAAAAGA GGTTGTTCTC AACAAACCTG AAGATTTTGT AAACTTTATC ATCAAAGATT TTATGGAGAA GGAAGGTTTT AAATATACCG TTTACAATGG CGAAAACGTA TGGCAGCTTG GACACGGCTG GGTTGCCAGT CCGCAATTTA TCAAAACAAC TTATGTCAAT GGAGTATTGA CCCTTGAAGC ATGGATAAAG TTTGCCTGGC TCCCCGGCGT TTATTCCGGC GAGATGGACC TGGAAGGCTT CTTTGGAGCT TTAGTTAAAA GTGCGTTAAA AGAAAAAATC AACAGCCTGA TAAAACTCCT TGAGCAACCT TTGCCGGATG AAGCTTACAA ATCTCAAGGA ACTGAAAACG GCGAGGCACC CGATTATCAA AACGCAATCC GTAGGGAACC GATACCTGTA AAAACTCACG ATACGTCTAA AAACGCACAA ATGGGGTTTG TATTCGGACT GGTGTCGCTG ATTGGTTGTG TTTTTCCGGT AGGCGGAATT TTGTTTGGAA CGCTGTCCAT TTTCTATGCA AAAAGCGGAC TGAATTCTTC GAAAAACAGC ATGGCAATTA CCGGCATTAT AATTTCCATT TTAATGATTA TTATTTCGTT CATCGGAATG ATATTGAATA TTTTAGAGAA AATAAGGCGA ATTACTTCTT GA
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Protein sequence | MPRFRKEVVL NKPEDFVNFI IKDFMEKEGF KYTVYNGENV WQLGHGWVAS PQFIKTTYVN GVLTLEAWIK FAWLPGVYSG EMDLEGFFGA LVKSALKEKI NSLIKLLEQP LPDEAYKSQG TENGEAPDYQ NAIRREPIPV KTHDTSKNAQ MGFVFGLVSL IGCVFPVGGI LFGTLSIFYA KSGLNSSKNS MAITGIIISI LMIIISFIGM ILNILEKIRR ITS
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