Gene Cthe_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0317 
Symbol 
ID4808535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp400705 
End bp401376 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content40% 
IMG OID640105728 
Producthypothetical protein 
Protein accessionYP_001036748 
Protein GI125972838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000861184 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTCGTT TTAGAAAAGA GGTTGTTCTC AACAAACCTG AAGATTTTGT AAACTTTATC 
ATCAAAGATT TTATGGAGAA GGAAGGTTTT AAATATACCG TTTACAATGG CGAAAACGTA
TGGCAGCTTG GACACGGCTG GGTTGCCAGT CCGCAATTTA TCAAAACAAC TTATGTCAAT
GGAGTATTGA CCCTTGAAGC ATGGATAAAG TTTGCCTGGC TCCCCGGCGT TTATTCCGGC
GAGATGGACC TGGAAGGCTT CTTTGGAGCT TTAGTTAAAA GTGCGTTAAA AGAAAAAATC
AACAGCCTGA TAAAACTCCT TGAGCAACCT TTGCCGGATG AAGCTTACAA ATCTCAAGGA
ACTGAAAACG GCGAGGCACC CGATTATCAA AACGCAATCC GTAGGGAACC GATACCTGTA
AAAACTCACG ATACGTCTAA AAACGCACAA ATGGGGTTTG TATTCGGACT GGTGTCGCTG
ATTGGTTGTG TTTTTCCGGT AGGCGGAATT TTGTTTGGAA CGCTGTCCAT TTTCTATGCA
AAAAGCGGAC TGAATTCTTC GAAAAACAGC ATGGCAATTA CCGGCATTAT AATTTCCATT
TTAATGATTA TTATTTCGTT CATCGGAATG ATATTGAATA TTTTAGAGAA AATAAGGCGA
ATTACTTCTT GA
 
Protein sequence
MPRFRKEVVL NKPEDFVNFI IKDFMEKEGF KYTVYNGENV WQLGHGWVAS PQFIKTTYVN 
GVLTLEAWIK FAWLPGVYSG EMDLEGFFGA LVKSALKEKI NSLIKLLEQP LPDEAYKSQG
TENGEAPDYQ NAIRREPIPV KTHDTSKNAQ MGFVFGLVSL IGCVFPVGGI LFGTLSIFYA
KSGLNSSKNS MAITGIIISI LMIIISFIGM ILNILEKIRR ITS