| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0299 |
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| Symbol | |
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| ID | 4808517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 374726 |
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| End bp | 376096 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640105710 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001036730 |
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| Protein GI | 125972820 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000180901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAG AAACGGCGTC AATAAAAAAG ATGAGTGTCT TTGCTCTCAC ATGGCCGATA
TTTATTGAAA CGCTGCTGAG AACAATGCTG GGAAATGTGG ATACTTTTAT GTTGAGTACA
TATTCCGACG ATGCCGTGGG GGCAGTAGGG GTTGTAAGTC AAATAAGTTA TATACTTATC
ATGCTGTACA ACGTTGTTTC GTCAGGAACA CTGGTGCTTA TATCCCAGTA TCTGGGCGCA
AAAAAGAAAA AGGAAGCTTC AGTGGTGGCT GTCACTTCAA TTGCAGGCAG TTTGATATTT
GGTTTGTTTG TCGGATTGGC TGTATTTCTG TTCAGAAGCC AGATATTAAC ATTTCTTAAT
TTGCCGCCCG AACTTATGGG ATATGCTATG ACATTTTTGG GAATTGTCGG AGGATTTTCT
TTTACCCAGG CATTGATAGC CACTTTGTCT GCAATAATCA GAAGCTATGG CAACACCAGG
ATAACCATGT ACATTTCTGT CGGCATGAAT ATCCTTAATA TTATTGGAAA CAGTATTTTC
CTGTATGGAC TGCTGGGGGC GCCGAAAATG GGAGTGACCG GTGTTGCCAT TGCAACTGTA
ATAAGCCAGG CTGTCGGTGT TGTTGCTATG CTGATTGTAA TGCTGACAGG ACTTAATCAA
AAATTTTCTT TCCGGGACCT TGTGCCGCTG CCGTGGGAGA TTTTAAGGGA TATATTGAAA
ATCGGACTTC CTTCTGCGGG TGAAGGAATT GCTTACGAAG CATCTCAGCT TACCATTACC
CGTATTATAA CGGTATTGGG AAAGGTTGCC CTTACAACCA GGGTATACAC TTTAAACATT
ATGTATTTTG TAATGGTTTT TTCAGTAGCG GTTGGTCAGG GAACTCAAAT TGTTGTAGGC
CATCTTGTGG GGGCGGGCGA TAATGAAAAA GCATACAAAA CATGTATTAA AAGTCTGAGA
TATGCTGTTG TGGTGGCAAT CATTCTTGCG GGAATTGTTT CGTTCTTTTC GGAGCAGCTT
CTTGGAATCT TTACGGATGA CCGGGCTATA ATTGAAATGG GGAGCAAACT CTTGCTGATT
GCAGTTATTT TGGAGCCGGG AAGAGTTTTC AATATTGTTA TAATAAACTC TCTGAGAGCG
GCGGGTGATG CCAGATTTCC CGTTATTATG GGTATTATAT CCATGTGGGG AATAGGAGTG
TTGCTGTCAT ATTTCCTGGG TGTGGCCTGC GGCTTGGGAT TGATAGGTGT ATGGATAGCC
TTTGCCAGTG ATGAATGGTT CAGAGGGATT GCCATGCTTC TGCGCTGGAG ATCCCGCGTC
TGGTATAAAA TGGCACTTGT AAAAAATCAG AATATTGAAA TGCCGGCTTA G
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| Protein sequence | MQKETASIKK MSVFALTWPI FIETLLRTML GNVDTFMLST YSDDAVGAVG VVSQISYILI
MLYNVVSSGT LVLISQYLGA KKKKEASVVA VTSIAGSLIF GLFVGLAVFL FRSQILTFLN
LPPELMGYAM TFLGIVGGFS FTQALIATLS AIIRSYGNTR ITMYISVGMN ILNIIGNSIF
LYGLLGAPKM GVTGVAIATV ISQAVGVVAM LIVMLTGLNQ KFSFRDLVPL PWEILRDILK
IGLPSAGEGI AYEASQLTIT RIITVLGKVA LTTRVYTLNI MYFVMVFSVA VGQGTQIVVG
HLVGAGDNEK AYKTCIKSLR YAVVVAIILA GIVSFFSEQL LGIFTDDRAI IEMGSKLLLI
AVILEPGRVF NIVIINSLRA AGDARFPVIM GIISMWGIGV LLSYFLGVAC GLGLIGVWIA
FASDEWFRGI AMLLRWRSRV WYKMALVKNQ NIEMPA
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