Gene Cthe_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0290 
Symbol 
ID4808508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp362395 
End bp363681 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content42% 
IMG OID640105702 
Producthomoserine dehydrogenase 
Protein accessionYP_001036722 
Protein GI125972812 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000435351 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAG TGAAAATTGG TTTCCTTGGT TTTGGAAATG TTGGAACCGG AGCTTATAAA 
ATTATTCGTG ATAACGGTAA TGATATTTTT CTAAGTGAAG GAGTTCGGCT GAAAGTTGCG
AAAATTCTTG TAAGAGATAT TAATAAGAAA AGAAATGTGG AAGTTGACAA TTCTATTCTG
ACGGATAAAT TTGAAGAAAT AGTAAATGAC CCCGGAATCT CCATTGTTGC TGAATTCATG
GGCGGTGTGG AGCCTGCCAG GGATTATGTT GTTTCCTGCC TTAAGAATAA AAAAACCGTT
GTGACTGCAA ACAAAGAGCT TATTGCCAAA CATGGATTGG AGCTTCAGGC GCTTGCCAAA
GAAAACGGAG TGGGTCTTTA TTATGAAGCA AGTGTGGCAG GAGGTATTCC GGTTATAAAG
ATTCTTGCAG AGTCGCTTCA GGCAAACAAA ATTGGCGAAA TTATGGGGAT TATTAATGGT
ACCACTAACT ATATACTTAC AAAGATGTCC GAGGAGGGAA GAAGTTTCAG TGATGTGCTT
GCAGAAGCAC AAAGACTGGG GTATGCGGAA CCGGATCCTA CTGCTGACAT AGAAGGCTAT
GATGCTATGT ATAAAATTTC CATATTATCC TCCATGGCAT TTCATAAAAA GGTGGATGTT
GACAAAATCT ACAGGGAGGG TATTACCCAA ATTACCCCGG AAGATATTGA ATACGGCAGG
GAGCTGGGGT TTGCAATCCG TCTTCTTGCC ATTGCCAAAA AGCGCAACAA TACCATCGAA
GTAAGAGTGC ATCCGACATT TATACCTCTT GACCATCCTT TGGCTGCTGT AAGGCATTCC
TTTAATGCAG TGTTCCTTAA AGGGGACGCC GTGGGGAATA TAATGCTGTA CGGCAGAGGA
GCCGGGGACC TTCCTACGGG AAGTGCAATT GTGTCGGATA TAATTACTGC ATGCCATCAG
AAGGACAAGC ACAGATATAT CAGTTTTTAC AATGACGAAG AAGGCTCAGC TGAGAAGATA
AAATTCAATG ATGACTGGGA AAGCGAATTT TTTGTCAGAC TTACGGTAAA GGACAAGCCG
GGAGTTCTTG CCAAAATTGC CGGATGCTTT GGCAAACACG GAGTGAGTAT AGCATCGGTA
ATTCAGAAGG ACAGGGGAAA GGACGCCGTT CCTTTGATAT TTGTAACCCA TTTGGCCAAG
GAGCTTTCAA TGAAAAAAGC CATATCTGAT ATTGCAGAAG TTGAGGATGT GTTAATGGTT
GAAAATATCA TACCGGTTGA GCGTTAA
 
Protein sequence
MEEVKIGFLG FGNVGTGAYK IIRDNGNDIF LSEGVRLKVA KILVRDINKK RNVEVDNSIL 
TDKFEEIVND PGISIVAEFM GGVEPARDYV VSCLKNKKTV VTANKELIAK HGLELQALAK
ENGVGLYYEA SVAGGIPVIK ILAESLQANK IGEIMGIING TTNYILTKMS EEGRSFSDVL
AEAQRLGYAE PDPTADIEGY DAMYKISILS SMAFHKKVDV DKIYREGITQ ITPEDIEYGR
ELGFAIRLLA IAKKRNNTIE VRVHPTFIPL DHPLAAVRHS FNAVFLKGDA VGNIMLYGRG
AGDLPTGSAI VSDIITACHQ KDKHRYISFY NDEEGSAEKI KFNDDWESEF FVRLTVKDKP
GVLAKIAGCF GKHGVSIASV IQKDRGKDAV PLIFVTHLAK ELSMKKAISD IAEVEDVLMV
ENIIPVER