| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0244 |
|---|
| Symbol | |
|---|
| ID | 4808592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 294822 |
|---|
| End bp | 296945 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640105656 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001036676 |
|---|
| Protein GI | 125972766 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.787519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGG CAATTAAGAA AGAATTAATA CTTGAAGGTT TGAATTGTGC CAACTGTGCA
CAAAAAATAG AAACAAAGGT AAGAGAAATT GAAGGAGTAA AAAACGCCTC GGTTAATTTT
GTGTCAAAAA AAATGATCCT GGAACTGGAT GACACGCTCG AACCGGCAAA TATTATAAAG
CAGGCGTCTT TGATTGCCAA AAGCATAGAA GAGGATATTG AAGTCATCGA GAAACAGGAT
AAGACCAATG AAAAATTGAA ATCCAACGAT AATGACTTCG ACAAAAAAGA GCTTGTAAAA
CTCGGTGTCG GAATACTTTT ATTTGTCGCC GCACTGTCCC TGAATTTAAA CTACTGGGTT
GAATTCGGCC TGTTCTTTGC AAGCTATATA ATTATCGGAG GAGAAGTGTT GCTAAAAGCC
TTCCGTAATA TATCAAAGGG TAAAGTATTT GATGAAAACT TTCTGATGGG CATAGCGACA
ATAGGAGCAT TTTTAATCGG AGAATTTCCT GAAGGCGTAG CGGTTATGAT TTTTTACCAA
ATAGGTGAAT ACTTGCAGAA TATGGCGGTA AACCGTTCAA GAAAGTCCAT CGCCGCTCTT
ATGGATATTC GTCCCGACTA TGCCAATCTC AAAGTCGGCA ACAGCATAAA AAAAGTATCC
GTGGAGGATA TTAAAGTCGG AGACATAATA GTTGTAAAGC CGGGTGAAAG AATACCTTTG
GACGGTAAAG TCGTTGAAGG AAGAACAATG CTGGATACAT CGGCCCTCAC CGGTGAATCG
GTTCCGCGGG AAGTTTACCC CGGTGAAGCT GTCCTCTCCG GTACAGTCAA TCAAACGAGC
CTTATCAGTG TAGAAGTTAC AAAACTGTTT GGCGAATCCA CGGTGTCAAA AATACTGGAC
TTGGTGCAAA ACGCAAGCAG CAGAAAAGCT CCGACCGAAA ACTTTATCAC AAAGTTTGCA
GGATACTACA CTCCCGCAGT AGTTTTTATC TCAGCGGCTT TGGCAGTAAT TCCTCCGCTG
GTTGTTCCCG GTGCCGGTTT CTTCGATTGG GTTTACAGAG CACTCATATT CCTTGTAATC
TCATGTCCCT GCGCTCTGGT AATATCCATA CCCCTTGGAT TCTTCGGCGG AATTGGTGGA
GCTTCAAAAA ACGGCATTCT CATTAAGGGC AGCAACTATC TTGAGGCATT AAACAGTGTT
GATACCGTAG TGTTCGATAA GACCGGTACC CTTACAAAAG GTGTGTTTAA TGTAACCGAG
GTAAATCCTT CATCGGATTT TACAAAGGAA GATTTACTAA AATATGCAGC CTATGCGGAA
AGCTTTTCAA ACCACCCAAT CGCATTGTCA ATAACGAAAG CTTTCGGCAA AACTATTGAT
AAAAGTAAAG TGGAAAGCTA TGAAGAAATT GCCGGTCATG GAATAAAAGC CGTCTACCAT
GGCAAAGAGA TACTTGCTGG AAATACCAAG CTTATGGCCA AAGCGGCCAT ATCCTTTGCC
AATATTGAAA CTTCAGGAAC TGTGGTCCAT GTGGCCGTTG ACGGAATTTA CGCAGGCAAC
ATTGTTATTT CGGATGAAAT AAAGGCGGAC TCAAAGAAAG CTTTGAAAGA ACTGAAAGAA
ATCGGTGTAA GAAAATTGGT AATGCTTACG GGAGACAATA ACAGCACTGC CCGCAAGGTC
GCAAGCGAAT TGGAAATCGA TGAAGTGCAT GCGGAACTTT TGCCTCATCA AAAGGTGGAA
GTGGTTGAAC TTTTGGATGG CAGCAAATCA AAAGGTGGCA AACTGGTATT CGTCGGTGAC
GGGCTGAATG ACGCGCCTGT GCTGGCGCGG TCGGATATAG GTGTCGCAAT GGGAGGCCTT
GGCTCGGATG CCGCAATTGA AGCCGCAGAT GTGGTGCTGA TGACCGATGA GCCCTCAAAG
CTTGTCACTG CCATTAAAAT TGCCAAAAGA ACCAAAACCA TTGTCTGGCA GAACATTATT
TTCTCGTTGG GCGTAAAAGT CCTGGTCTTG CTGCTCGGCG CAGCAGGCAT AGCCACAATG
TGGGAAGCCG TTTTCGCAGA TGTCGGAGTT GCGCTGTTGG CAGTTCTCAA TGCCATGAGG
GTAATGAGAA TCAAGAATAT ATAA
|
|---|
| Protein sequence | MKQAIKKELI LEGLNCANCA QKIETKVREI EGVKNASVNF VSKKMILELD DTLEPANIIK
QASLIAKSIE EDIEVIEKQD KTNEKLKSND NDFDKKELVK LGVGILLFVA ALSLNLNYWV
EFGLFFASYI IIGGEVLLKA FRNISKGKVF DENFLMGIAT IGAFLIGEFP EGVAVMIFYQ
IGEYLQNMAV NRSRKSIAAL MDIRPDYANL KVGNSIKKVS VEDIKVGDII VVKPGERIPL
DGKVVEGRTM LDTSALTGES VPREVYPGEA VLSGTVNQTS LISVEVTKLF GESTVSKILD
LVQNASSRKA PTENFITKFA GYYTPAVVFI SAALAVIPPL VVPGAGFFDW VYRALIFLVI
SCPCALVISI PLGFFGGIGG ASKNGILIKG SNYLEALNSV DTVVFDKTGT LTKGVFNVTE
VNPSSDFTKE DLLKYAAYAE SFSNHPIALS ITKAFGKTID KSKVESYEEI AGHGIKAVYH
GKEILAGNTK LMAKAAISFA NIETSGTVVH VAVDGIYAGN IVISDEIKAD SKKALKELKE
IGVRKLVMLT GDNNSTARKV ASELEIDEVH AELLPHQKVE VVELLDGSKS KGGKLVFVGD
GLNDAPVLAR SDIGVAMGGL GSDAAIEAAD VVLMTDEPSK LVTAIKIAKR TKTIVWQNII
FSLGVKVLVL LLGAAGIATM WEAVFADVGV ALLAVLNAMR VMRIKNI
|
|---|
| |