Gene Cthe_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0213 
Symbol 
ID4808631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp260094 
End bp260867 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content36% 
IMG OID640105626 
Producthypothetical protein 
Protein accessionYP_001036647 
Protein GI125972737 
COG category[S] Function unknown 
COG ID[COG5523] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATTAG GCAGGTTAAA GAGAAGGGCG AGGTTCCAGC TAAGCAACAA TGGAGCTAAT 
CTGGCGCTTT TATATATGAT GACCATGGCA TTTTATATTC TTTTGTTTTT GTTGCTGGGG
CGTTTCAGCC TTCAGACTGC ATTAATAATT AACGGTCCGG TTTTGCTGGG ATTTACAATT
TATTTTCTTG CTATAGCAAG GGTGGAAAAA GAGCCCAGAA CAAGAAAAGA AAAGGAAGAA
AAGGATAAGG AGAAAAAGCT TAAAGGAAAA TTTACTGTCT TCGGGATGGA AATAAAGCTT
GGAAAAAAGA TAAAAATAAA TCTCGATACG GCGGAACATC CTTACCGCGT CAGTTTAAAA
TATGTGTTTT ACGGTTTTAA ATATTTTATA AACGCTGCTG CGCTTTATAT CTGGACTACC
CTTTTGATAT TGGTTTGGTC GCTTTTATTG ATTGTTCCTG GAATAATCAA GGCCCTTGAT
TTGAGTATGA GCTTTTTCAT ATTGGCTGAC AATCCAACAA TGGATATCAG AAAAGCGGCA
GATTTGAGTA CGAAAATAAT GAAAGGCCAC AGGAAAGAGT TGTTTTTGCT TACCTTGAGC
TTTATAGGCT GGATATTAAT TTCAATATTT ACTTTTTCCG TTGGTTTTGC CATTACGATA
CCGTATATTA TGACTACCTA TGCACTTTTT TATGATGAGG TTAAAAAACA GAGTATAGAA
AACGGAATTA TTGCAGAAGA TGAAATTGGA ACCAGAAGGT TGTGGGAATA TTAA
 
Protein sequence
MELGRLKRRA RFQLSNNGAN LALLYMMTMA FYILLFLLLG RFSLQTALII NGPVLLGFTI 
YFLAIARVEK EPRTRKEKEE KDKEKKLKGK FTVFGMEIKL GKKIKINLDT AEHPYRVSLK
YVFYGFKYFI NAAALYIWTT LLILVWSLLL IVPGIIKALD LSMSFFILAD NPTMDIRKAA
DLSTKIMKGH RKELFLLTLS FIGWILISIF TFSVGFAITI PYIMTTYALF YDEVKKQSIE
NGIIAEDEIG TRRLWEY