Gene Cthe_0180 details

Gene Information

• Locus tag: Cthe_0180
• Symbol: ruvC
• ID: 4808668
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 216998
• End bp: 217486
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640105591
• Product: Holliday junction resolvase
• Protein accession: YP_001036614
• Protein GI: 125972704
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTATAA TGGGAATTGA CCCCGGATTT GCAATTGCCG GGTATGGTAT AGTAAAATAT 
GAAGGAAACA AGTTTACTTC CGTAGATTAT GGCGCAATTA CCACTGAAAG CTCAATGGAG 
CTTCCAAAAA GGCTTTTGGT TTTATACAAC GGTTTGAAGG AAATTATTGA GAAGTACAGA 
CCTGAGGCAA TAGCTGTAGA AGAGCTTTTT TTCAATAAAA ATATAAAAAC GGCTCTTGCC 
GTGGGGCATG GAAGAGGTGT TGCGGTTTTG GCGGCCGCTC AATCGGGAAT TGATGTTTTT 
GAATACACTC CCATTCAGGT AAAACAGTCA ATAGTGGGAT ACGGAAGGGC GGAAAAAACA 
CAGGTACAGC AGATGGTAAA AGCAATACTT AATCTTCCGG CTATCCCTAA GCCGGATGAT 
GTGGCGGACG CACTGGCTGT GGCGGTATGT CATGCCCATT CCTATAAAAT GATAAGCTAT 
GGACTGTGA 

 

Protein sequence

MIIMGIDPGF AIAGYGIVKY EGNKFTSVDY GAITTESSME LPKRLLVLYN GLKEIIEKYR 
PEAIAVEELF FNKNIKTALA VGHGRGVAVL AAAQSGIDVF EYTPIQVKQS IVGYGRAEKT 
QVQQMVKAIL NLPAIPKPDD VADALAVAVC HAHSYKMISY GL