| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0179 |
|---|
| Symbol | |
|---|
| ID | 4808667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 215545 |
|---|
| End bp | 216762 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640105590 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_001036613 |
|---|
| Protein GI | 125972703 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA AAGAAAAAGT AATCCTTGCC TATTCCGGCG GTCTGGATAC TTCAATAATC
ATTCCCTGGC TTAAAGAAAA TTATGACTAT GAAGTCATTG CAATGGCAGC TGACGTTGGA
CAGGGCGAAG AGCTTGAACC CTTAAGAGAG AAAGCTATAA AAACCGGGGC AAGCAAAATA
TATATTGAAG ACTTGAAAGA AGAATTTGTG ACAGACTTTA TTTTCCCCAC ATTAAAAGCA
GGTGCCGTAT ATGAAGGAAA ATATCTTTTG GGTACATCCT TTGCAAGACC TCTTATAGCA
AAGAGAATGG TTGAAATTGC CTTAAAAGAA GGCGCTACAG CAGTCGCTCA CGGAGCAACG
GGAAAAGGAA ACGACCAGGT CCGTTTCGAG CTGACCGTCA AAGCTCTTGC TCCCCATCTT
AAAATCATTG CTCCGTGGAG AATATGGGAC ATTAAATCCA GAGAAGATGA AATCGAATAC
GCCCAGGCAA GAAACATCCC CATTCCTGTA TCAAAAGAAG ACAACTACAG CATGGACAGA
AACCTCTGGC ACCTCAGCCA TGAAGGCTTG GATTTGGAAG ACCCATGGAA CGAACCGCAG
TATGACAAAA TATTAAAGCT CATGGTTCCG CCGGAAAAAG CTCCGGACAA ACCCACCTAT
GTTGAAATAT ATTTTGAAAA GGGTATACCT AAAAAAGTTA ACGGTGTGGA ATACGGACCT
GTGGAGCTTA TTGAAGTTCT TAACAAAATC GGCGGTGAAA ACGGTATAGG AATCGTTGAC
ATAGTGGAAA ACAGATTGGT CGGAATGAAA TCCAGAGGCG TTTATGAAAC TCCGGGTGGA
ACCATTCTTT ATGCGGCTCA CAGAGAGCTT GAGCTTTTGT GTCTTGACCG TGACACTCTC
CATTACAAAG ATCTTGTGGC TCAAAGATTT GCAGAGCTTG TTTATTACGG ACAGTGGTAT
ACTCCTCTGC GTGAGGCTAT TTCAGCCTTT GTTGATGTTA CTCAGGAGAC GGTTACCGGT
ACAGTAAGAT TAAAACTTTA CAAAGGAAAT ATAATAAGCG CGGGAGCCAA ATCCGATTAT
TCCCTCTACA GTGAAGAACT TTCCACGTTC GGAGAAGACA ATGTATACAA TCAAAAGGAT
GCCGAAGGAT TTATAAATCT CTTTGGTCTT CCGATGAAGG TTCAGGCTCT TATGAAAGAA
AAGAATAAAG GCAAATAA
|
|---|
| Protein sequence | MSQKEKVILA YSGGLDTSII IPWLKENYDY EVIAMAADVG QGEELEPLRE KAIKTGASKI
YIEDLKEEFV TDFIFPTLKA GAVYEGKYLL GTSFARPLIA KRMVEIALKE GATAVAHGAT
GKGNDQVRFE LTVKALAPHL KIIAPWRIWD IKSREDEIEY AQARNIPIPV SKEDNYSMDR
NLWHLSHEGL DLEDPWNEPQ YDKILKLMVP PEKAPDKPTY VEIYFEKGIP KKVNGVEYGP
VELIEVLNKI GGENGIGIVD IVENRLVGMK SRGVYETPGG TILYAAHREL ELLCLDRDTL
HYKDLVAQRF AELVYYGQWY TPLREAISAF VDVTQETVTG TVRLKLYKGN IISAGAKSDY
SLYSEELSTF GEDNVYNQKD AEGFINLFGL PMKVQALMKE KNKGK
|
|---|
| |