Gene Cthe_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0173 
Symbol 
ID4808661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp208546 
End bp209640 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content38% 
IMG OID640105584 
Productdehydrogenase (flavoproteins) 
Protein accessionYP_001036607 
Protein GI125972697 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG CCATAATTGG TGCAGGACTG GCCGGGCTGT CCTGTGCTTT TGAATTGGAG 
AGAAACGGCA TAACGCCGGT TATTTTTGAG AAAAGATCTT TTATAGGAGA AAACTACATG
TTTCCCAGTA CAACTCTAAG ACTGTTTGAC AGGGGTTTTA ATAATCCCGT AAAATATCTC
AAAAAAAAAT ACGACCTGAG TCTTATACCT TTTTCCCCTT TAAGAGAAAT AACAATGAAG
GGACCCACAA AAGAAGGAAC CGTAAGCGGA AAATTGGGAT ATGTATTCAT GAGAGGAGAC
GAAAAAGAAT CCCTGGAAAA TCAGATTGCA AAGCATATCA GGACTCCCAT GCATTTTGAC
ACATATATAA ATCTTGAGGA TGTAAAAAAT GATTTTGATT ATATTATTGT CGCGACCGGC
GATGAAACCG TTGCGAACCG GCTTGGAGTA TGGCACACAA CGACAACTGT TTATACAAGG
GTTGCTCTTG TATTGGGAAA TTTCAAAGTG GGTTGTGCAA AAATGTGGGT CAACCGGGAT
TATGACAAAG CGTGCTACGC ATTTTTGTCT CCCCATAGTA AAAAAAGTGC GAGACTGCTT
TTATCTGTCA ATGATATATC ACCCCATGAA TTTGACTATT ACTGGAATAA TTTTGTAAGG
CTTGAGGAAG TGAAATATAA AATAAATGAA ACCAGGGACA TTGTAACAAG ACTTGGATAC
GTATCCACTG CAAAAGTGGG AAATGTTTAT TTGACCGGAA ATGCCGCAGG GCTTATTGAT
GATTTTTTGG GTTTTGGCGC CATTAACGCC ATTGAAAGCG GAATTCTTGC GGCAAAGGCA
ATCATAAAAG GAAAAGACTA CAATGAAATG GTAAAATCTA TAAAAAATCA TGTAGCCGGC
ATTCATGAAC TTAGAAAAAT GATAAACGAA TTTGACAATG ATGATTATGA GCGGCTTATA
AAAATTTTGA CCATGCCTGT TATAAAACGG ATTATTTACA ACAATCCTCT GGCAAAGGTC
CAAAGTATTA CGTCTGCGGC AAAAGAGTTC AACAACATGA AGCATAAAAG GCAGCGGCGT
TTTTCCAAAA GCTAG
 
Protein sequence
MKIAIIGAGL AGLSCAFELE RNGITPVIFE KRSFIGENYM FPSTTLRLFD RGFNNPVKYL 
KKKYDLSLIP FSPLREITMK GPTKEGTVSG KLGYVFMRGD EKESLENQIA KHIRTPMHFD
TYINLEDVKN DFDYIIVATG DETVANRLGV WHTTTTVYTR VALVLGNFKV GCAKMWVNRD
YDKACYAFLS PHSKKSARLL LSVNDISPHE FDYYWNNFVR LEEVKYKINE TRDIVTRLGY
VSTAKVGNVY LTGNAAGLID DFLGFGAINA IESGILAAKA IIKGKDYNEM VKSIKNHVAG
IHELRKMINE FDNDDYERLI KILTMPVIKR IIYNNPLAKV QSITSAAKEF NNMKHKRQRR
FSKS