Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0150 |
Symbol | |
ID | 4808708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 189867 |
End bp | 191171 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640105561 |
Product | RNA modification protein |
Protein accession | YP_001036584 |
Protein GI | 125972674 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.839753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGG CTGCATTCTA TACGTTAGGC TGCAAAGTAA ATCAGTATGA GACTGAGGCA ATTTCCGAAA TGTTTGAAAA AGCGGGCTAC AAGATAGTAG ACTTTGAAGA TGAAGCCGAT GTTTATGTAA TAAATACATG CACCGTTACA AATTTGAGTG ACCGAAAGTC ACGGCAAATG ATAAGGAGAG CAAAAAGAAA CAACGAAAAT TCCATAGTTA TTGTGATAGG CTGTTATGCC CAAACCGCTC CTGAGGAAGT AAGCAAAATC GAAGGAGTAA ACTTGGTCGT GGGGACCAAG GACCGAAGCA GGATTTTGGA GTATCTTAAG GAATTGGAGA CTTCCGGCGG CCGGCGAAAT TACGTCGGGG ACATAATGAA AACCCGGGAA TTTGAGGAAT TGGGTGTTAA TGTATACAAG GAGCGTACAA GGGCTTTCAT TAAGATACAG GAAGGTTGCA ATCAGTTTTG CACATACTGC ATTATTCCCT ATGCAAGAGG GCCTGTAAGA AGCCGCTCGG AGGAGAATAT ACTGAAGGAA GTGTCAGGAC TTGCACACAG TGGGTATAAA GAAGTGGTGC TTACCGGAAT ACATGTTGCA TCTTATGGAA AAGATATAAA GAATACTTCT TTGATTGATA TTATAAGAAA AGTACATGAA ATAGAAGGAA TAGAAAGAAT AAGGCTTGGT TCCATCGAAC CTACGACGGT GACGGAAGAA TTTGTCAGAG CGATAAAGGG AATGGAAAAA TTATGTCCGC AGTTTCATAT TTCTCTTCAA AGCGGGTGTG ACAGTACTTT AAAAAGAATG AACCGAAAAT ATACCACTAA AGAGTATTTA AGGTCTGTGG AGCTTTTGAG GGAAAATTTG AAGGATGTGG CCGTGACAAC TGATGTTATG GTTGGCTTTC CCGGGGAGAC TGACGAGGAG TTCAATGAAA CATGCAGGTT TGTCGAAAAA GTTCTTTTTG CAAGGATGCA TGTATTCAAA TATTCCCGCA GGAAAGGCAC GCCGGCGGCA TCTTATCCTG ACCAGGTTGC GCCGCAGAAA AAAGAAGAAA GAAGCCGCAT ATTGATTGAG CTTGCTTCCC GAATGACTTT GGAATACAAC AAAAGTTTCA CAGGCAGGGT TTTGCCGGTG TTGTTTGAAC AGGAAGTAAA AGGAAAAGAA GGATTTATGG AAGGGCTTAC ACCGAATTAT ATAAGGGTTG AATGCAAAGG TGATAAAGAT ATTGAGGGTC AAATTTTAAA TGTGCTTTTA AGAGAGGCAA AAGATGATTA TATTGTCGGA GAGATTGTAA ATTGA
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Protein sequence | MKRAAFYTLG CKVNQYETEA ISEMFEKAGY KIVDFEDEAD VYVINTCTVT NLSDRKSRQM IRRAKRNNEN SIVIVIGCYA QTAPEEVSKI EGVNLVVGTK DRSRILEYLK ELETSGGRRN YVGDIMKTRE FEELGVNVYK ERTRAFIKIQ EGCNQFCTYC IIPYARGPVR SRSEENILKE VSGLAHSGYK EVVLTGIHVA SYGKDIKNTS LIDIIRKVHE IEGIERIRLG SIEPTTVTEE FVRAIKGMEK LCPQFHISLQ SGCDSTLKRM NRKYTTKEYL RSVELLRENL KDVAVTTDVM VGFPGETDEE FNETCRFVEK VLFARMHVFK YSRRKGTPAA SYPDQVAPQK KEERSRILIE LASRMTLEYN KSFTGRVLPV LFEQEVKGKE GFMEGLTPNY IRVECKGDKD IEGQILNVLL REAKDDYIVG EIVN
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