Gene Cthe_0119 details

Gene Information

• Locus tag: Cthe_0119
• ID: 4808745
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 150848
• End bp: 151297
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640105530
• Product: anti-sigma F factor
• Protein accession: YP_001036553
• Protein GI: 125972643
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
• TIGRFAM ID: [TIGR01925] anti-sigma F factor

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCAA TAAATGAGGT TAGACTGGAG TTTGTCAGCA AATCAAGTAA TGAATCATTT 
GCCAGAGTTG TGGCGGCGGC TTTTGTATCT CAAATAGATC CGAATTTGGA GGAACTTGCG 
GATGTGAAAA CGGCGGTTTC CGAAGCCGTG ACAAATGCAA TAATTCATGG ATACGAAAAC 
GAGCCTGGTT TTGTAAAAAT GACTTTAAAG CTCTATGAAG ATGCCGTGGA GATAAGCGTA 
ACCGACGAGG GCAAGGGCAT AGAAGATATA GAAAAGGCCC GGCAGCCTAT GTATACTTCC 
AGGCCTGACA TGGAAAGGTC AGGGATGGGA TTTACAGTCA TGGAGAGTTT CATGGACAGG 
GTTGACGTTG TGTCCGAGGT GGGCAAAGGC ACAACCGTAA CAATGTTCAA AACTTTTAAT 
TCTGTGAGGG GTAGAAAAAA TACCCCGTAA 

 

Protein sequence

MNPINEVRLE FVSKSSNESF ARVVAAAFVS QIDPNLEELA DVKTAVSEAV TNAIIHGYEN 
EPGFVKMTLK LYEDAVEISV TDEGKGIEDI EKARQPMYTS RPDMERSGMG FTVMESFMDR 
VDVVSEVGKG TTVTMFKTFN SVRGRKNTP