| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0098 |
|---|
| Symbol | |
|---|
| ID | 4808722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 130163 |
|---|
| End bp | 130972 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640105507 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_001036532 |
|---|
| Protein GI | 125972622 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1994] Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTACC ACAATTATTT AATGGAATAT TTATTAATTT TTTTTTCTAT GGCAATTCAC
GAAACGGCTC ACATTGTTGC GGCGGCAGTG CAAAAAAGAA TACTTGTTTC GGTTAGGATT
ACAGCTTTAG GGTTAAATGC CGTCATAAAA GAAAAACATG ATGTTGATGC AAATCGTTTT
TTAATAAACA TCAGCGGGCC ATGTGCAAAT ATTTTAATGT TTTTTATTTG TATTATAATT
AAAACGTATT ATTTTAACGC CGGTTATAAT ATGCGTTTTT TTATCTATGC CAATATATGT
CTTGCTTTAT TTAACATGCT TCCGATTCTG CCTTTGGACG GCGGAAGGAT TCTAAAAGAC
GTTCTTGTTT CAAAAATGGG TCTTGTCAGG GGATGCAAAT ATACAAGAAG ACTGTCTTTG
ATATTTTCGG CTTTGCTTTT GGTTCTTGGA ATTTTTCAAT ATATAATAAG TAAATATAAT
TTCAGCATAC TTTTAATTGC CGGATATATG TTATATTTCC AAAAAAGCGA CAGACCGGAG
GAGATATTAA TGAATATCAG AAACCTCTTG TTTAAACGTT CAAGGTTTTT AAAGAAAGGA
GTTTATCCGG GGAGGGAATT GGTGGTATTG GAATCCACCC GTTTGGGGGA GTTGATAAAA
AGCATGGATT TTGACAGGTT TCATATTATA TATGTTGTAA ATGAAAACAT GCGTGTGGTC
AGGGTCTTTA CTGAACAGGA AATTATCGAT TATATAATGA AATATAATGC GGATATAAGT
TTTAGGGATT TAATGGAAAC TGTGGACTGA
|
|---|
| Protein sequence | MYYHNYLMEY LLIFFSMAIH ETAHIVAAAV QKRILVSVRI TALGLNAVIK EKHDVDANRF
LINISGPCAN ILMFFICIII KTYYFNAGYN MRFFIYANIC LALFNMLPIL PLDGGRILKD
VLVSKMGLVR GCKYTRRLSL IFSALLLVLG IFQYIISKYN FSILLIAGYM LYFQKSDRPE
EILMNIRNLL FKRSRFLKKG VYPGRELVVL ESTRLGELIK SMDFDRFHII YVVNENMRVV
RVFTEQEIID YIMKYNADIS FRDLMETVD
|
|---|
| |