Gene Cthe_0084 details

Gene Information

• Locus tag: Cthe_0084
• ID: 4808779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 117726
• End bp: 118271
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640105493
• Product: hypothetical protein
• Protein accession: YP_001036518
• Protein GI: 125972608

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTCAA AGAAGATTGT ACCGAATAAA TTTGAGCAAT TTCTGAAAAA CAGAGAAAGC 
CTTATCGAGC AGTATGCCAA AGGGGACCTG ACAAAAGAGG AATTTATCGA AGCAAACTAC 
AGGTGCATAA ATTCCCTCGA TATAAAACCA TTTCAAAAAA TTGACAATGT AAAAAAAGCA 
ATATACAATT ATCAATACTA CAATGTTCTG GCAAAATATT ACCAAAAAAA GGCTCATGAC 
CTAAGTCGCA ATCATGAGGC GAGAAGTGAT TTTCTTGAAC AGTCTAATTA TTACTATTCA 
AAAAAGGACG AAGTTACGGC AAAACTTCTT AGACTTTTGG ACTTTAAAGG AATAGAAGCA 
TATTTTGTAA AGGTAAAGTC AAAAAATCTC AGAAAAAAGT TGTTTGAAAT TGTGCTTTTG 
GACTATGACA ACATTATTCT TCACTCAAAA AGTGAAGCTA TTTTAAACAT GCTTATGAAA 
GAAAATGTCT TCATAAACGA AGTAAGAAAT TCCCTGGTGG ACAGCTACAT AAACCAGAAG 
TATTAG 

 

Protein sequence

MPSKKIVPNK FEQFLKNRES LIEQYAKGDL TKEEFIEANY RCINSLDIKP FQKIDNVKKA 
IYNYQYYNVL AKYYQKKAHD LSRNHEARSD FLEQSNYYYS KKDEVTAKLL RLLDFKGIEA 
YFVKVKSKNL RKKLFEIVLL DYDNIILHSK SEAILNMLMK ENVFINEVRN SLVDSYINQK 
Y