Gene Cthe_0072 details

Gene Information

• Locus tag: Cthe_0072
• ID: 4808767
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 105911
• End bp: 106396
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640105481
• Product: phage shock protein C, PspC
• Protein accession: YP_001036506
• Protein GI: 125972596
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1983] Putative stress-responsive transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 58
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACG GTTTGGTCCG TTCAAAGTAT GACAGGGTTA TATCAGGTGT GTGTGGGGGA 
ATAGGAGAAT ATTTTAATAT TGACCCTACC ATTGTAAGGC TTGGTTTTGT TATAGCGACT 
GTTTTATTTA GTGGCCTTGG GCTGTTTGCG TATATTGTGG CAATTTTTGT AATACCCGAA 
GCTGACAGCG CAGCCAATGG CTTTACTGAT TATGCCCAAA AAGGATTTAA CGATTATTAT 
GACCCTGACA AGGATTTCAG CAAAGTATTG GAAGATGATG AGGAATATAT AAAAAAGGAT 
TCTCATGGCG GAAAAACCTT TGTTGGCATT TGTCTCATTG TCCTTGGACT TGTCTCCCTG 
TTAAGAGAAC ATTTTAGGGA ATATATTAGC AAATTTATTC ACATTGATTT TAAAATTTTA 
GTGTCTTTGC TGCTGATAGT TGTTGGAGCG TTGATTATAT TCAGAGGCAG GAGGCGTTTG 
CCATGA 

 

Protein sequence

MKNGLVRSKY DRVISGVCGG IGEYFNIDPT IVRLGFVIAT VLFSGLGLFA YIVAIFVIPE 
ADSAANGFTD YAQKGFNDYY DPDKDFSKVL EDDEEYIKKD SHGGKTFVGI CLIVLGLVSL 
LREHFREYIS KFIHIDFKIL VSLLLIVVGA LIIFRGRRRL P