Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0060 |
Symbol | |
ID | 4808755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 92558 |
End bp | 93061 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640105469 |
Product | hypothetical protein |
Protein accession | YP_001036494 |
Protein GI | 125972584 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000251524 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACATA TGAGTCTTTA TAACGAATGG CAAAAGCTTT GTGAAAAACA GAGGACGGAA GAGGAGAACA ACGAATTTTG GAATACTTAC CTTGAGAAAG AGATGAAAGT ATATGAGTTT ATTTTGGAGC ACCACGATGA GGTTGTGGAA GGAAAACTTG CAGAGCTTGC GGAAAAATTT GACATGGAAC CTGTGGTTTT CGCAGGATTC ATGGACGGCA TAAACACAAG TTTAAAAAAT CCCGTGAAAC TTGAGGAGCT TGGTGATGAT TCAAACATCA GGCTTGAAGT TGATTTTGAA AAGCTGTATT ACAATATGCT GGATGCAAAG GCGTACTGGC TTTATAATCT TCCCCAGTGG GACAACATAT TGAGTCAGGA AAGAAGAAAC GAAATATTGA AGGATTATAA CAGGGCACAC ATTGCGGTAA GCAGGAAAAT TGGAAGAAAT GACCCGTGTA TTTGCGGCAG CGGCAAAAAA TACAAAAAAT GTTGCGGAGC ATAA
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Protein sequence | MVHMSLYNEW QKLCEKQRTE EENNEFWNTY LEKEMKVYEF ILEHHDEVVE GKLAELAEKF DMEPVVFAGF MDGINTSLKN PVKLEELGDD SNIRLEVDFE KLYYNMLDAK AYWLYNLPQW DNILSQERRN EILKDYNRAH IAVSRKIGRN DPCICGSGKK YKKCCGA
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