| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0050 |
|---|
| Symbol | |
|---|
| ID | 4808815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 65172 |
|---|
| End bp | 66131 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640105459 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001036484 |
|---|
| Protein GI | 125972574 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA AAAGAATCTT GGTTGTACTG GTAGCAACTG TAATGGTTTT TTCACTGATT
TCATGCAATT TAGGTCTTGC ATTGTACATT AATGCCAAAG CCGGTGAGAG CTACAAGTAT
CATGTTGAAA CCGTCCAAAC AGTGGATGTG AAGCAAAACG GTCAAAAGAT AACAACTAAT
CAAAATATAG CCTTTGACTT TATTGCAACC GTTAATGAAG TGGATTCGGA AGGCAATCTT
ACAGTGGAGT ATAAATATGA TGCCATGAAA TTTGATATGG ATGCAAATGG GATAAATGAA
TCTTTTGATT CAAAAGATGC AAATTCCGAT AATCCGATGG CTGCGATATA CAACAGCTTT
ATAGGCAAGG GTTTTACCGC TAAAATGACT AAATATGGTG AAGTCAAGGA AATTGGCGGT
GTTGATGACC TTTTAAATTC AATAGTGGAT TCTGTGGATT TGGGTGATGA TGAAGGAGCA
CAGAATTTAA AAGAAAAGAT AAAAGAAAGT TTGGGAGGAA GCTTTAGTGA TGAAGCAATG
AAATCATATG TTCAGTCAGC AGTGATATTT CCTGAAAATG ACGGTATGAA GGTGGGAGAC
TCGTGGACTG CTAACAACAG CATTAAATCC ATTATTGATG TAAATATGAC CATTACATAT
ACTCTTGACA AAATTGAGGG GGACACTGCC TATATTTCGG TTGAAGCTGA TTTCAAAACG
GACCCTTCCA AGCCTATTGA ATATATGGGA ATGGAACTGG TTTCAGATTT ATCGGGTACG
ATGACAGGAG ACGTAAAAGT TAACACTAAA AACGGCTTTT TGTCTGAAGG AGAAATTATT
CAGCAAATAT CAGGTAATAT GAGTCTTGTA ATACCGGCAA TGGAGGGTAT TGAAAGCCAG
ACGCTGGAAT TGCCCATGGA GTCAAAAGTG ACTATTACTT ATTCGACAAC TAAAATGTAA
|
|---|
| Protein sequence | MKSKRILVVL VATVMVFSLI SCNLGLALYI NAKAGESYKY HVETVQTVDV KQNGQKITTN
QNIAFDFIAT VNEVDSEGNL TVEYKYDAMK FDMDANGINE SFDSKDANSD NPMAAIYNSF
IGKGFTAKMT KYGEVKEIGG VDDLLNSIVD SVDLGDDEGA QNLKEKIKES LGGSFSDEAM
KSYVQSAVIF PENDGMKVGD SWTANNSIKS IIDVNMTITY TLDKIEGDTA YISVEADFKT
DPSKPIEYMG MELVSDLSGT MTGDVKVNTK NGFLSEGEII QQISGNMSLV IPAMEGIESQ
TLELPMESKV TITYSTTKM
|
|---|
| |