Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0048 |
Symbol | |
ID | 4808813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 63314 |
End bp | 64123 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640105457 |
Product | copper amine oxidase-like protein |
Protein accession | YP_001036482 |
Protein GI | 125972572 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TAGCAATAAT GATATTGATA ATATTCATGT CAACCCTTCT TCTGACAAAT GTAGGATATG CAATTGATAT ACCGCTTCGA GTGGTTGTGA ATGGGGAAGA GGTGAAATTT CCGGATGCCC AGCCGTTTAT TGACGCAAAC GGAAGAACAC AGACACCGGC AAGGTTTATA GGGGAAGCTT TGGGAGCGAC GGTAACCTGG GACGGAAATG CGAAGAAAGC TGTATTCGAG AAAAGTGAAA CAACCTTGGT ATTGTTTATT GGTAAAAGAG AATACGAGGT GAACGGGCAA AAGAAGCAGA TGGATACGGA AGCGTTGTTG ATAGAGGGAA GGACGTTTGT ACCGGCTCGT TATGTGGCGG AAGCATTTGG TGCGACAGTT AGTTGGAATG CTGCGATTAA GACGGTGTAT ATAAATATGA ATAAGACGGG TAAGGTGGAA AATGAAGGTG ATACCAGGGA AGTAGCCGGA TTTATAGTGC CGAAGGATAT AGATTTGGTA GTTGGACCTG GTACGAAAGA TTCTAGCTAT GAAGCAACGT TTACAATAAA CTTTTTAAAA AACGATGTAG AGAAACAGAA AGATGACATG GAAAAAATAT TGTTACAAAA GTTTAGTGAA GATACAGTAA AAGAAATTAT GAGTGTTGTG AGGACAAAGG TAAAGGATAC GGATGTTATT GAAGAAAGAT ATTTTTATGA TAAGAAGACT GGCCAATACA TGTATATGCC TAAATCATGG CCGTTAAGAG GTTCTACAAT TACTCTGTAT ATATACAAAA AAGGAGTTGT GCCATTTTAA
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Protein sequence | MKKIAIMILI IFMSTLLLTN VGYAIDIPLR VVVNGEEVKF PDAQPFIDAN GRTQTPARFI GEALGATVTW DGNAKKAVFE KSETTLVLFI GKREYEVNGQ KKQMDTEALL IEGRTFVPAR YVAEAFGATV SWNAAIKTVY INMNKTGKVE NEGDTREVAG FIVPKDIDLV VGPGTKDSSY EATFTINFLK NDVEKQKDDM EKILLQKFSE DTVKEIMSVV RTKVKDTDVI EERYFYDKKT GQYMYMPKSW PLRGSTITLY IYKKGVVPF
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