Gene Cthe_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0048 
Symbol 
ID4808813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp63314 
End bp64123 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content39% 
IMG OID640105457 
Productcopper amine oxidase-like protein 
Protein accessionYP_001036482 
Protein GI125972572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAGCAATAAT GATATTGATA ATATTCATGT CAACCCTTCT TCTGACAAAT 
GTAGGATATG CAATTGATAT ACCGCTTCGA GTGGTTGTGA ATGGGGAAGA GGTGAAATTT
CCGGATGCCC AGCCGTTTAT TGACGCAAAC GGAAGAACAC AGACACCGGC AAGGTTTATA
GGGGAAGCTT TGGGAGCGAC GGTAACCTGG GACGGAAATG CGAAGAAAGC TGTATTCGAG
AAAAGTGAAA CAACCTTGGT ATTGTTTATT GGTAAAAGAG AATACGAGGT GAACGGGCAA
AAGAAGCAGA TGGATACGGA AGCGTTGTTG ATAGAGGGAA GGACGTTTGT ACCGGCTCGT
TATGTGGCGG AAGCATTTGG TGCGACAGTT AGTTGGAATG CTGCGATTAA GACGGTGTAT
ATAAATATGA ATAAGACGGG TAAGGTGGAA AATGAAGGTG ATACCAGGGA AGTAGCCGGA
TTTATAGTGC CGAAGGATAT AGATTTGGTA GTTGGACCTG GTACGAAAGA TTCTAGCTAT
GAAGCAACGT TTACAATAAA CTTTTTAAAA AACGATGTAG AGAAACAGAA AGATGACATG
GAAAAAATAT TGTTACAAAA GTTTAGTGAA GATACAGTAA AAGAAATTAT GAGTGTTGTG
AGGACAAAGG TAAAGGATAC GGATGTTATT GAAGAAAGAT ATTTTTATGA TAAGAAGACT
GGCCAATACA TGTATATGCC TAAATCATGG CCGTTAAGAG GTTCTACAAT TACTCTGTAT
ATATACAAAA AAGGAGTTGT GCCATTTTAA
 
Protein sequence
MKKIAIMILI IFMSTLLLTN VGYAIDIPLR VVVNGEEVKF PDAQPFIDAN GRTQTPARFI 
GEALGATVTW DGNAKKAVFE KSETTLVLFI GKREYEVNGQ KKQMDTEALL IEGRTFVPAR
YVAEAFGATV SWNAAIKTVY INMNKTGKVE NEGDTREVAG FIVPKDIDLV VGPGTKDSSY
EATFTINFLK NDVEKQKDDM EKILLQKFSE DTVKEIMSVV RTKVKDTDVI EERYFYDKKT
GQYMYMPKSW PLRGSTITLY IYKKGVVPF