| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0045 |
|---|
| Symbol | |
|---|
| ID | 4808810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 58680 |
|---|
| End bp | 59489 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640105454 |
|---|
| Product | copper amine oxidase-like protein |
|---|
| Protein accession | YP_001036479 |
|---|
| Protein GI | 125972569 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAGCTATTAC GATATTAACG GTATTTATGT TAACTGTTTT TTTGGCAAAT
GTGGGTTATG CAATTGATAT ACCGCTTCGC GTAGTTGTAA ATGGGGAAGA GGTGAATTTC
CCGGATGCAA AGCCGTTTAT TGATGCAAAC GGAAGAACAC AGACACCGGC AAGGTTTATT
GGAGAAGCTC TGGGAGCGAC GGTAACCTGG GACGGAAATG CGAAGAAGGC TGTATTTAAG
ATGAATGGAA CAACGTTGGA GTTGTTTATT GGGAAAAAGG AGTATCAGCT GAACAGGCAA
AAGAAGCAGA TGGATACGGA AGCATTGTTG ATAGAGGGAA GGACGTTTGT ACCGGCTCGT
TATGTGGCGG AAGCATTTGG CGCAACGGTT AGTTGGAGGG CTTCAATTAA GACGGTGTAT
ATAGATATGA ATAAGACGGG TAAGGTGGAA AATGAAGGTG ATACCAGGGA AGTGGCCGGA
TTTATAGTGC CGAAGGGGAT AGATTTAATG GTTGCAGGTG CAGATGAAGA TTCTGGTTAT
GAAGCGGTTT TTACGATCTC CTTTTTAAGG AAGAATGTTG AAAAGCAGAA AGATGATATG
GAGAAGATAT TATTACAAAA GTTTAGTGAA GATACGGTAA AAGAAATTAT GAGTGTTGTG
AGATCAAAGG TAAATTATAC AGATGTTATT GAAGAGAGGT ATTTTTACGA CAAAAAAACT
GACCAATATA TGTATATGCC TAAGTCATGG CCGACTAGAA CATCCACAAT TACTTTATTT
ATATATAGGA AAGGAGATAA ACCTTTTTAG
|
|---|
| Protein sequence | MKKIAITILT VFMLTVFLAN VGYAIDIPLR VVVNGEEVNF PDAKPFIDAN GRTQTPARFI
GEALGATVTW DGNAKKAVFK MNGTTLELFI GKKEYQLNRQ KKQMDTEALL IEGRTFVPAR
YVAEAFGATV SWRASIKTVY IDMNKTGKVE NEGDTREVAG FIVPKGIDLM VAGADEDSGY
EAVFTISFLR KNVEKQKDDM EKILLQKFSE DTVKEIMSVV RSKVNYTDVI EERYFYDKKT
DQYMYMPKSW PTRTSTITLF IYRKGDKPF
|
|---|
| |