Gene Cthe_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0034 
Symbol 
ID4808799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp43237 
End bp43896 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content39% 
IMG OID640105443 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001036468 
Protein GI125972558 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000350916 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT ATTTGGATGT TTTAAAAAAA GTTAATTTGT TTAAAGGAAT TGACGAATCG 
GATTTGCTTT CGCTTTTGGC CTGTTTGTCA AGCAAGCTTG AGCATTACAA AAAAAACGAG
ATTGTTTTTA TGAGCGGTGA GGCCATTAAT TCTTTTGGCA TAGTTTTGTC AGGAGAGGTT
CAGATTGTAC AGGAAGATTA TTACGGTAAC AGAAGTATCC TGGCCAGGAT AGGTGTGGGC
AATCTGTTTG CCGAATCTTT TGCCTGTGCT CAAATAGAAG CTCTTCCGGT CAGTGTAATT
ACAACCACCG AAAGCGATCT TCTTTTTATC GACTGCCGTA AACTCGCAAA GCCATGTGCT
ACTGCCTGCG CTTTTCACAG TCGCCTGATT CAAAATATGC TGCATATTAC TGCGATGAAA
AATATATCTT TAACACAAAA AATTGAGTTT ATTTCAAAGC GTACCACTCG GGAAAAGCTT
TTGGCCTATC TTTCCAGTGA GGCACAAAAG GCAGGCAGCA ATCGTTTTTC CATTCCGTTC
AACCGTCAGG AACTTGCAGA TTATCTGTCG GTTGACCGCA GCGCAATGTC GGCGGAACTT
AGCAAGCTTA GAAAAGAAGG TATTTTAAAT TATAACAAAA ACCATTTTGA ATTATTGTAA
 
Protein sequence
MKKYLDVLKK VNLFKGIDES DLLSLLACLS SKLEHYKKNE IVFMSGEAIN SFGIVLSGEV 
QIVQEDYYGN RSILARIGVG NLFAESFACA QIEALPVSVI TTTESDLLFI DCRKLAKPCA
TACAFHSRLI QNMLHITAMK NISLTQKIEF ISKRTTREKL LAYLSSEAQK AGSNRFSIPF
NRQELADYLS VDRSAMSAEL SKLRKEGILN YNKNHFELL