Gene Cthe_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0029 
Symbol 
ID4808794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp36062 
End bp36700 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content41% 
IMG OID640105438 
Producthypothetical protein 
Protein accessionYP_001036463 
Protein GI125972553 
COG category[S] Function unknown 
COG ID[COG4832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.379928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTG ATTTTAAGAA AGAATACAAA GAACTTTACA TGCCAAAAAC CGAACCCGAA 
ATAATCGATG TTCCACAGAT GAATTTTATA GCGGTACGCG GGAAAGGCGA CCCGAATGAA 
GAGGATGGTG CTTATAAACA GGCCGTCAAT ATTCTTTATG CAATTGCATA CACAATTAAG 
ATGAGCAATA AAAGCGGACG CAAAATAGAC GGCTTTTTTG AATATGTTGT GCCGCCCCTG 
GAAGGATTCT GGTGGCAGGA AGGCGTAGAG GGAGTGGACT ACAGTCAAAA GGATAAGTTT 
AATTGGATTT CGGTGATACG CCTGCCTGAT TTTGTTTCAA AAGAAGATTT TGAGTGGGCG 
AAAGAAGAAG CTGCCCGCAA AAAGAAAATA GACTGCTCTT TAGCGGAGTT TTTAACCATT 
AAAGAAGGAC TTTGTGTACA AGCTCTGCAT TTAGGTCCTT TTGATGATGA GCCCAAAACA 
GTTGCAAAGA TGGATGAATA TTTGATAAAA GAAGGATATG AAAAGGACTT TTCCAACGAA 
CGGCTGCATC ATGAAATATA TTTGTCCGAC CCCCGCAAGG TTGAACCGGC AAAATATAAA 
ACGGTTATAC GGCATCCGGT AAAGAAAGCA ACCAAATAA
 
Protein sequence
MAFDFKKEYK ELYMPKTEPE IIDVPQMNFI AVRGKGDPNE EDGAYKQAVN ILYAIAYTIK 
MSNKSGRKID GFFEYVVPPL EGFWWQEGVE GVDYSQKDKF NWISVIRLPD FVSKEDFEWA 
KEEAARKKKI DCSLAEFLTI KEGLCVQALH LGPFDDEPKT VAKMDEYLIK EGYEKDFSNE 
RLHHEIYLSD PRKVEPAKYK TVIRHPVKKA TK