| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0025 |
|---|
| Symbol | |
|---|
| ID | 4808790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 31259 |
|---|
| End bp | 32632 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640105435 |
|---|
| Product | adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| Protein accession | YP_001036460 |
|---|
| Protein GI | 125972550 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTATGACT TGCAAAGAAA AGACTTGGAA TATATTTGGC ATCCCTGCTC TCAGATGAAG
GATTATGAAG ATTTTCCTCC GATTGTTATT GAGAGGGGAG AGGGGCCGTA CATCTTTGAT
GTTCTGGGCA ATCGGTATAT TGATGCGGTA TCTTCCTGGT GGGTCAATCT TTTCGGACAC
TGCAACAAAA GAATCAATGA TGCAGTCAAA AGGCAGCTTG ACAGCCTTGA ACATGTGATA
TTTGCAAATT TTTCCCACAG GCCTGCCATT GAGTTGGCCG GGAAAATCGT TGAAATTACC
CCGCAAGGGC TAAACAAGGT GTTTTTTGCC GATAATGGTT CTTCGGCCGT TGAAATTGCA
CTAAAGCTTA GTTTTCAATA TCACTTGCAA ACCGGAAGCT GTGAAAAGAA AAAATTTGTT
GCCCTGTCCG ATGCCTATCA CGGGGAAACG CTTGGAGCTT TGGCAGTAGG TGGGCTGGAC
CTGTACAGTA AAATCTACAA GCCTTTGATG ATGAGCACGA TAAAAGTGCC AGGACCTGAC
TGTTACCGAT GCAAATATGG AAAGGAGCGC ACCTGTTGTG AAGCTGAATG TTTTTGTGAA
ATGGAAAAGA TATTGGAAGA AAAACACAGG GAAATTTGCG GAGTAATAAT TGAGCCGATG
GTTCAAGCGG CGGCAGGAAT GAAAATATAT TCTGCAAAGT ATCTTATTAA GCTTAGGGAG
GCGTGCTCTT ATTACAACAT CCACTTGATT GCCGATGAAA TCGCAGTGGG ATTTGGAAGA
ACGGGAAAAA TGTTTGCCTG TGAGCACGGC GGTATAAGTC CCGATATCAT GTGCCTGTCG
AAAGGGCTTA CCGCAGGCTA TATGCCTCTT TCGCTGGTTG TTACCACTCA GAAGATTTAC
GATGCTTTTT ACAGCGATTA TATTGAGCTT AAGGCGTTTC TGCACAGCCA CAGCTATACC
GGAAATCCCC TGGCTTGTGC CGCAGCCTTG GAATCGCTGA AAATATTTGA GGATGACGAT
GTTTTAAACA AGAACAGGGA AAAATCCGGG TTGTTCAGAA AGCTGGCAGA ATCCCTTGCC
CATAGCCATC CCTATGTGGG CGAATTTCGG CAGATAGGTA TGATTGCCGC ACTGGAGTTG
GTTGAAAACA AGGCCCAGAA GAAAGAGTTT GATTGGAAAA AACGTGTGGG ATACAATATT
TATAAGCTGG CCTTAAAAAA AGGTTTGCTG CTTCGGCCTT TGGGGAATGT TTTATATTTT
ATGCCGCCGT ATGTTGTTGG GCAAAAAGAC ATTGAGGACA TTGTAAGCGG AGCTTTTTAT
GCGATAAATG AGTATTTTGG GCTTGATTTT AAGTATAAAA GGATGTTCCC ATAA
|
|---|
| Protein sequence | MYDLQRKDLE YIWHPCSQMK DYEDFPPIVI ERGEGPYIFD VLGNRYIDAV SSWWVNLFGH
CNKRINDAVK RQLDSLEHVI FANFSHRPAI ELAGKIVEIT PQGLNKVFFA DNGSSAVEIA
LKLSFQYHLQ TGSCEKKKFV ALSDAYHGET LGALAVGGLD LYSKIYKPLM MSTIKVPGPD
CYRCKYGKER TCCEAECFCE MEKILEEKHR EICGVIIEPM VQAAAGMKIY SAKYLIKLRE
ACSYYNIHLI ADEIAVGFGR TGKMFACEHG GISPDIMCLS KGLTAGYMPL SLVVTTQKIY
DAFYSDYIEL KAFLHSHSYT GNPLACAAAL ESLKIFEDDD VLNKNREKSG LFRKLAESLA
HSHPYVGEFR QIGMIAALEL VENKAQKKEF DWKKRVGYNI YKLALKKGLL LRPLGNVLYF
MPPYVVGQKD IEDIVSGAFY AINEYFGLDF KYKRMFP
|
|---|
| |