Gene Cthe_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0024 
Symbol 
ID4808789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp30415 
End bp31266 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content39% 
IMG OID640105434 
Productbiotin biosynthesis protein BioC 
Protein accessionYP_001036459 
Protein GI125972549 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID[TIGR02072] biotin biosynthesis protein BioC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00323673 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGATA AAAAGATTCT TCAAATGCAC TTTAGCCGTA ATGCTAAAAA CTATGACGCA 
TACGCGAAAG TTCAAAAGAA AATGGCAAAT ACTCTGCTGG ATATGCTGGA CTTGGATAGT
AAGAGCAGAT TGGATATTCT GGATGTGGGC TGTGGCACAG GGTATCTTAC GAAGCTTTTG
CTTGACCGTT GGCCGGATGC CCGAATAACG GCAATAGATA TTGCTCCGGG AATGATTGAA
TATGCACGGG ACAGATTTAA CGAGAGCAAT GTGGAGTTTG CCTGCCTTGA TATTGAAGAA
GCGGAACTTA ACCAAAAATA TGACCTTGTT ATTTCAAATG CCACTTTTCA ATGGTTTAAC
GACTTAGGAG GCACTGTCAA TAAGCTTGTT CAAAGCCTTA AAAGTGACGG AGTACTTGCC
TTTTCCACTT TTGGGCATAT GACTTTTAGC GAACTTCATT TTTCTTATGA AACTGCCCGC
AGAAAACTTA AAATAGACGA AGAATTTCCG CCAGGCCAAA AATTCTGTAA CGCAAAAGAG
ATACTTAAGA TTTGCTGTGA GACATTTGAA GGGCTTGAGG GCTTTGAATT TGATACCGTC
AAAAAAGAAA GTCTCGAATA TGAGTATTTT TACACGGTAA GAGAATTTTT AGATTCCGTG
AAAAAAATCG GAGCGAACAA CAGTAACAAA CAAAGAAAGG TAAACACCGC TCTTACGAAA
GAAATGATAC GGATTTACGA GGAGATGTTT AAAGTAAATG GATTGGTGAG GGCAACCTAT
CATTGCATCT TCATAACATC AAGAAAGAAA CTTGCGGCAA ATACAAGAAG GCTGGTGAAC
GCAGTTGTAT GA
 
Protein sequence
MIDKKILQMH FSRNAKNYDA YAKVQKKMAN TLLDMLDLDS KSRLDILDVG CGTGYLTKLL 
LDRWPDARIT AIDIAPGMIE YARDRFNESN VEFACLDIEE AELNQKYDLV ISNATFQWFN
DLGGTVNKLV QSLKSDGVLA FSTFGHMTFS ELHFSYETAR RKLKIDEEFP PGQKFCNAKE
ILKICCETFE GLEGFEFDTV KKESLEYEYF YTVREFLDSV KKIGANNSNK QRKVNTALTK
EMIRIYEEMF KVNGLVRATY HCIFITSRKK LAANTRRLVN AVV