Gene Cthe_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0003 
Symbol 
ID4808816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2599 
End bp3528 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content36% 
IMG OID640105413 
Productankyrin repeat-containing protein 
Protein accessionYP_001036438 
Protein GI125972528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGGA AAAAGATAAT GATTGTTATG CTGATTGTTG TAATGACTTT TCCGATTTTA 
TTATCTTCAT GTCAATTTGA TATATTAGGG AAAGAGGAGG AATATAGGAT TACAAACGTA
AAAATTTTTA AGGACACACC GGTATGGGAA CTGGCATTGG CTGTTAAGAA TGAGAAAACC
CGTACAATAG AGAAATTGGC AAAAGAGAAT CCGGAGTTGC TGAATTATCA GGAACCGAAA
TATGGAGCGA CTTTACTGTT GTGGGCAGTT GGGATGGAAA AGTATAAATC TGCAGAAGCA
CTATTAAAAT GTGGAGCTGA CCCCAATATT GCCTCAACAG TTGACGGAAT GACTCCGCTT
TATTTGGCAG CAGGATTTTC TTGGATAGAC AATTACGCGA AAAAAGACCC TAAGTTTGTA
AAGCTCCTAC TGAAATATAA TGCAGACCCA AACATAACTT ATGGTGGAAA TGCCATTATT
GAGCCAGGAA CTAGTCCGCT TATGAACTCA ATACGATGTG GTATTGAAAA AACGAAAGCA
TTAGTAGAAG CAGGAGCTTA TATCAACTAT AAAACTAAAA GTGGGACTAC AGCTGCAATT
AAAGCATTGC TAGCCGGTCA AAATGCGACA TTGGAAGCAT TGGAATATGC ACATTATTTG
ATAGTAGAGA AGAAAGCTAA GGTAACAGAT CCCTATTATC CATGGTTGGT TTATGAAGAA
AACAATATCC AAGAATTATA TCCGGTGGAT ATATTAAGGC GTTGGGTTTA TCCATTGGAT
TCGGAAGAAT ACCGAATAAA AATGGAGATT GTAGAGGAAT TTGCCCGACA AGGTGTAAAT
TATTGGGATA CAGAAATTGA TAAATATACT CTTGAACAGA TAAAAAAGCT TTATCCTGAT
ACTTGGGAGG AATATATAAA AAGGTATTAA
 
Protein sequence
MSRKKIMIVM LIVVMTFPIL LSSCQFDILG KEEEYRITNV KIFKDTPVWE LALAVKNEKT 
RTIEKLAKEN PELLNYQEPK YGATLLLWAV GMEKYKSAEA LLKCGADPNI ASTVDGMTPL
YLAAGFSWID NYAKKDPKFV KLLLKYNADP NITYGGNAII EPGTSPLMNS IRCGIEKTKA
LVEAGAYINY KTKSGTTAAI KALLAGQNAT LEALEYAHYL IVEKKAKVTD PYYPWLVYEE
NNIQELYPVD ILRRWVYPLD SEEYRIKMEI VEEFARQGVN YWDTEIDKYT LEQIKKLYPD
TWEEYIKRY