| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3904 |
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| Symbol | traI |
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| ID | 4796533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009007 |
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| Strand | + |
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| Start bp | 76011 |
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| End bp | 79346 |
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| Gene Length | 3336 bp |
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| Protein Length | 1111 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640103014 |
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| Product | hypothetical protein |
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| Protein accession | YP_001033863 |
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| Protein GI | 125654669 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCG TGAGCAACGT CTCGGCCGGC GCCGCTGCCA GCGGATACTA TCAGGCCGAA
GGGTATTACG TCGCCGGAAG CCCTGAGGCA GAGGCGGCAG CTTCGTGGTT CGGCAGTGCG
GCTGATGAGC TTGTCGCAAT GGGTCAGGAA GAGTTTGCGG GGCGCGTGGA CGACGCTGCG
TTCTCGGCCA TGCTCGACGG TCACGCTCCG CCGACCCAAC GCGATGCCGA AGGCCATTGG
AAGGAAGGTC AGACGCTCGG CCGCGTCGTG GACGGGGAGC GGCAGCACCG ACCGGGGATC
GACCTGACCT TCTCCGCCTC CAAGTCGGTG TCGATCATCG GTCTGGTCGC TGGCGATGAG
CGCGTGATCG CAGCCCATGA CGAGGCGGTG AAGGCCGCCA TGAGCTACGT CGAAGAGAAG
TTCGTCCGGA CACGTCGGGA GGTGAACGGC GAGATCGTGG CGGTCCCCGG CAAGATGGTG
GCCGGGCTTT TCCGCCATGA TACGTCGCGG GCCCTCGATC CGCAGCTCCA TACCCATGCC
GTCATACAGA ACATGGTCCT CGGCGAGGAC GGCAAGTGGA CCGCCCTCTC CAACGAGGAA
ATCTACCGCA ACAAGATGCT GATCGGGGCG ATCTACCGCA ACGAGTTGGC GCAGAACCTC
GAGCGGGCGG GATATGCCGT CGAGCGTGTC GGCCATGACG GCATCACCGA GATCAAGGGC
GTCCCGCGCG AGCTGATGGA TGGCTTCTCG AAGCGCCGCA AGGAGATCGA GGCGGCCCTC
GATGAGCGTG GGATCGAGAG GACGGCTGTA GATAGCGCAT TGGCAGCCCT CGCCACCCGC
AGGAACAAGC AGAAGGGCAT CGACCGGGCA GAGCTGCGTG AAGCGTGGGA GAAGGAAGCG
CAGTCCATGG GCGTCTCCCT CGATCAGCTT CGCGAGCTCC GGCAGACAGC CACTCTGACG
GCAGCCACGC GCCTGCCCGG CGTGACGCGA GACGGGATCG CTGCGCCCTC CCCTGCTGAT
CGCGCCGCGG CCGCCGTCGA GTTCGCGATT GCGCATGTGA GTGAACGCAA TGCCGTCTAC
TCCGGCTCCG AGCTGGTCCG CGTGGCCCTG AGCCGAGCCA AGGATGTGGG GATCCGGCAG
ATCGAGGGCG CCATCGCGAC CAAGGAAGAG ACGGGCCGTC TGGTGCCGGT CCATGTCCAT
GCCTGGAACG AGAAGCGCTC GCCCGATGCC ATGACCCGCG GGGAGGGCTT CTCCGGGACG
CTGAAGGCGA TGGGCACCGC GCCGTATCAG AACGACCCTA GAAACCGCGA CTCCTTCTTC
GTGACCATCG AGACGCGGAA CGGGGAGCAG ACGGTCTGGG GTGCCGGCTT GCAGGCGGCG
CTCGAACGGC AGGAAGCCAG TCCGGGCAGC CTTGTCCATC TGACGGTGCA GGGCCAGAAG
CCCGTGACGG TGATCGGCGC CGATGGCAAA CCGGTGTCCG CCCATCGCAA TCTCTGGACG
GCGGAAGTCA TCGAACGCGC CTCGGAGCGG TCGGATCGCT CCAACGGCCC TCAGCCGCAG
CGGGAGACGA TCAGGCTCTA TTCGGACGAT GCCACCCTTG CCCTCGAGCG CATGGTGCTG
GGCGAGTATC GGGCAGCCCG GCGTCAAGGC GGAGTGGAGT TGCCAGCTCG CCTGAGAGTC
ACTGGCGGGA TCAAGATGAG CGGAGAAGCT CTTCTGCGTG ACCGCCTTGA CAAGACAACT
CTGACGGAGG GCCAGAAGGA AGCGGTCGCA CTCGGTCTCA CAGGCAGAGG CCGGTTCGTC
GGCGTGCAGG GGTATGCCGG CACGGGCAAA ACGCACATGG TGGAAACCCT GCGCCGCTAT
GCCGAGCGGG CGGGCTTCAC CGTGGAAGGC GCGGCACCGA CGAACAAGGC CGCCGCAGAG
CTCGCCTCGG CAGTGCCCGC GGCCGGCACC GTCGCCCGCT TCCTGCTCGC GGATGCTCCG
GGCGACAAGA AGCGCTCCAT CCTCGTGGTC GACGAGGCTG GGATGATCTC CACGCGCGAC
ATGCACGCCC TGATGACCAA GGCAAACGAG CTCCGATACG CTCGGGTTAT CCTCGTAGGT
GACGTGAAGC AGCTCGACCC GGTGAGCGCG GGCTCGCCCT TCGCGCAGCT CCAGAAGGCG
GGAATGCCGA CCGCCATCAT GGCCGACATT CAGCGCCAGA GAAACGAAGA TGCCCGGAAA
GCCGTGCTCC ATGCCATCCG CGGCGAGGTC CGTGCTGCCT TCTCGCGGAT CGAGGATCTT
CGCACGCCAG AGAAGAACCA GAGCTTTACC GGCGAGGTTG CCCGGGCGTG GCTCGGATTG
CACAGCTCGG TGCGCGAGCG GACCGGGATT GTGGTTCTGA CCAACCGCGT CCGGGGGGAA
GTTAATGCCG CGATTCGCGA CGAGTTGAAA CGGGAACATC GGCTCGGCGC TCAGGATGTG
ACGGTCGCCA GTCTCACGCC GCTCTCGCTC ACCCGCGCCG AAGCGCGCGA GGCGGCCAGC
TACAAGGCTG GTGACGTGGT GATCTCGGTG CGCAGCGTGG AGGGGTTGGA GCGGGACAAA
CTCTACCGGG TTACATCCAC CCTGCCCTAT CAGAACAGCA TCACCTTGCG TCCGGAGGGA
GGCGGCGCCG AGGTCGCGCT GACACTCGGA CATGGGTCGA AAGCTGCGGG ATCGCTCGCC
GCATTCGAGG TGGGCAAGCG CGAATTTGCG GCCGGCGATG AGGTCAAATT CGCGATCACC
GACAAGGATT GCGGAGCGAT TAACGGTGCG CGCGGCCGGA TCACAAAGGT GACGGAAGCC
CAGATCGACG TCACGCTGCA CGGCGGGCGG AAGCTCTCCG TGCCCACGGA TTCACTCGCC
GCCCGTGGCC TAGACCATGC CTATGCGGCC ACCGCACACG ACTTTCAGGG CGCCACAGTG
GACAGGATCA TCGTGGGCAT GACCCCCGAT GAGCAGCTCA CCAGCCAGAA GTCCTTCTAC
GTCAATATCT CCCGCGCGCG GGACCATGTG ACGCTTGTGA CGACCGATCC CGGGAAGCTC
GCTGATCGGA TTCAGCGTGA GACCGGCGAA CGTCCGGCCG CGCTCGACGC CTACGCGCAG
CGGCTCTCGG ACGAGCGGAA CGCGGCCGGA AAGGTGCCGC AGAATGAGCC CCCCTCCCCT
GCCCGCGACC CTGACCGGGT GCCGCAAATC CTGCGCGAGC AGGCGCAGAA ACTGCGGCAG
GCGGAGCCCC CGCAGGAGCG CACTGATCGG CAGGTGGAGC AATTCCTGGC GCAGTTCGAG
GAGAAACAGA AGGTGAAGGA AGGACCGATC CGGTGA
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| Protein sequence | MMSVSNVSAG AAASGYYQAE GYYVAGSPEA EAAASWFGSA ADELVAMGQE EFAGRVDDAA
FSAMLDGHAP PTQRDAEGHW KEGQTLGRVV DGERQHRPGI DLTFSASKSV SIIGLVAGDE
RVIAAHDEAV KAAMSYVEEK FVRTRREVNG EIVAVPGKMV AGLFRHDTSR ALDPQLHTHA
VIQNMVLGED GKWTALSNEE IYRNKMLIGA IYRNELAQNL ERAGYAVERV GHDGITEIKG
VPRELMDGFS KRRKEIEAAL DERGIERTAV DSALAALATR RNKQKGIDRA ELREAWEKEA
QSMGVSLDQL RELRQTATLT AATRLPGVTR DGIAAPSPAD RAAAAVEFAI AHVSERNAVY
SGSELVRVAL SRAKDVGIRQ IEGAIATKEE TGRLVPVHVH AWNEKRSPDA MTRGEGFSGT
LKAMGTAPYQ NDPRNRDSFF VTIETRNGEQ TVWGAGLQAA LERQEASPGS LVHLTVQGQK
PVTVIGADGK PVSAHRNLWT AEVIERASER SDRSNGPQPQ RETIRLYSDD ATLALERMVL
GEYRAARRQG GVELPARLRV TGGIKMSGEA LLRDRLDKTT LTEGQKEAVA LGLTGRGRFV
GVQGYAGTGK THMVETLRRY AERAGFTVEG AAPTNKAAAE LASAVPAAGT VARFLLADAP
GDKKRSILVV DEAGMISTRD MHALMTKANE LRYARVILVG DVKQLDPVSA GSPFAQLQKA
GMPTAIMADI QRQRNEDARK AVLHAIRGEV RAAFSRIEDL RTPEKNQSFT GEVARAWLGL
HSSVRERTGI VVLTNRVRGE VNAAIRDELK REHRLGAQDV TVASLTPLSL TRAEAREAAS
YKAGDVVISV RSVEGLERDK LYRVTSTLPY QNSITLRPEG GGAEVALTLG HGSKAAGSLA
AFEVGKREFA AGDEVKFAIT DKDCGAINGA RGRITKVTEA QIDVTLHGGR KLSVPTDSLA
ARGLDHAYAA TAHDFQGATV DRIIVGMTPD EQLTSQKSFY VNISRARDHV TLVTTDPGKL
ADRIQRETGE RPAALDAYAQ RLSDERNAAG KVPQNEPPSP ARDPDRVPQI LREQAQKLRQ
AEPPQERTDR QVEQFLAQFE EKQKVKEGPI R
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