Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3855 |
Symbol | |
ID | 4796518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_009007 |
Strand | - |
Start bp | 25733 |
End bp | 28822 |
Gene Length | 3090 bp |
Protein Length | 1029 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640102969 |
Product | hemolysin-type calcium-binding protein |
Protein accession | YP_001033818 |
Protein GI | 125654624 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.460711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATTC TTCCGACCTT CAGCGTCACC AGCACCCCCG TCGTCGAGGG CAATTACCTC ACCTACACCA TCCGGCTCTC CGAGCCCGCC CCCGATGCGG TGAGCGTGGA TTACCTGTTC CGCTCCGGCA CCGCGCTGCT CGACGAGGAT TTCTATTCCA CCGCCCCCTC GGGCACGCTC GTCTTCGCCC CCGGCGAGAC GGTGCTGACC CTCCAGATCC GGTCCTACAA CGACAGGCTC GACGAGATCG ACGAGAGCTT CTTTCTCGAA CTGAGCGATC CGCAGGGCGC GCAGTTCGGC GCCAACATCT CGACCCTCGT CACCGCGGGC TGGGTGATCG ACGACGATGG CGTGGGGGTG AACCGGGCGC TGGCCGTCTC GAACCCCGTG GTGACCGAGG CCGCGGGCGG GCAGGCGCTC TTCACCCTCA CGCTGTCGGA GGCCTTCACC ACCGACCGCA GCTTCACCTA CACGACCTAC GATGGGTCGG CCCGGGCGGG CGCGGATTAC GTGGCCCGCA CCGGCACAGT CACCTTCCTC GCCGGCCAGA CCGAGGCCAC GGTCGCGGTC AATCTGATCA ACGATGGCGC CGTCGAGGCG GGCGAGACCT TCGGCCTCGC GGTCACCGGC GCCCATGGCG TGCCCGCCGC GACCGGCACG GCCGAGATCC TGAACGACGA CGGGCCGGTG CCGGTGATCT CGGTCGAGGG CGACCGGGTG GTCGAGGGCA GCTACCTCAC CTATACGATC CGGCTCTCCG AGCCCGCGAC CGACGCGGTG AGCGTGGATT ACCTGTTCCG CTCGGGCACC GCGCTGCTCG ACGAGGATTT CTATTCCACC GCCCCCTCGG GCACGCTCAC CTTCGCCCCG GGCGAGACGG TGCAGACCCT CCGCATCCGC TCCTACAACG ACAGTCTCGA CGAAATCGAC GAGAGCTTCT TTCTCGAGCT GAGCGAACCG CAGGGCGCGC GGTTCGGCGC CAACATCTCG ACCCTCGTCA CGACGGGCTG GGTGATCGAC AATGACGGCG TGGGGGTGAA CCGGGCACTG GCCGTCTCGA ACCCGGTGGT GACCGAGGCC GCAGGCGGGC AGGCGCTCTT CACCCTCACG CTGTCGGAGG CCTTCACCAC CGACCGCAGC TTCACCTACA CGACCCATGA CGGCTCGGCC CGGGCAGGCG CGGATTATGT TGCCCGCACC GGCACCGTCA CCTTCCTCGC CGGCCAGACC GAGGCCACGG TCGCGGTCAA TCTGATCAAC GATGGCGCGG TCGAGGCGGG CGAGACCTTC GGTCTGGCCG TCACCGGCGC CCATGGCGTG CCCGCCGCCA CCGGCACGGC CGAGATCCTG AACGACGACG GGCCGGTGCC AGTGATCTCG GTCGAAGGCG ACCGGGTGGT CGAGGGCAGC TACCTCACCT ATACGATCCG GCTCTCCGAG CCCGCGACCG ACGCGGTGAG CGTGGATTAC CAGTTCCGCT CCGGCACCGC GCTGCTCGAC GAGGATTTCT ATTCCACGGC CCCCTCGGGC ACCCTCACCT TCGCCCCCGG CGAGACGGTG CAGACCCTCC GCATCCGTTC CTACAACGAC AGTCTCGACG AGATCGACGA GAGCTTCTTT CTCGATCTGA GCGATCCCCG CGGCGCGCAG TTCGGCGGCG GCAACCGCGC CCTGTCCACC GGCGGCTGGG TGCTCGACAA TGACGGGGTG GGGCTGAACC GCTCGGTCTC GGTCGGCCAT GCCACGCTGC AGGAAGGGCC CGGCGGCCGG GTCGCGGTCT TCGTGGTCGA GCTTTCGGCC GCCTCGGCCG AGCGGATCGC CATCGGCTTC CAGACCCTCG CCGGGACGGC CCGCCCGGGC AGCGACTTCG CCGCCCGGTC GGGCGAGGTG GTCTTCCTGC CCGGCCAGAC CCGGGCCGAA ATTCTCATCC CCATCCTCGA CGATCTCGTG CTCGAGAATA CCGAGAGCTT CAGCCTACGC CTCGTGCCGC CCTTCCCCAG CGCCATCTCC TCGGCCACGC CGGTGCCGGT GGGGGTGGCC ACCCTCCTCG ACGGCACGCT CCGCGGCTCG GGCGGCAACG ACCGGCTGAT CGGCACGGCC AATGCCGAGC GGATCGAGGG GTTCGGCGGC AACGACCGGA TCGAGGGCCG GGGCGGCAAT GACCTTCTGT CGGGCGGCGC GGGCAACGAC CTGCTCGACG GCGGCGGCGG ACGCGACCGG ATGGTGGGGG GCACGGGCAA CGACCGCTAT ATCGTCAACC ATGCCGGGGA CAGCACGATC GAGCTGGCCG GGGGCGGTAT CGACACGGTG CAGAGCAGCC TCTCCTGGAC CCTGGCCGCC AATGTCGAGC GGCTGGTGCT GACCGGCGGG GCTGCCCTGT CGGGCACCGG CAACGGGCTT GCGAACCTGC TCACCGGCAA TGGCGGGGCG AACCGGCTGC AGGGGCTTGC CGGCAACGAC ACGCTGAACG GCGGCGGCGG GCGCGACGTC ATGATCGGCG GGACGGGCAA CGACACCTAC ATCACCGATG GCGGCGACAC GATCGTGGAG CGCGCGGGCC AGGGGGTGGA TGTGGTGCGC GCCTCGGTCA GCTACACGCT GGGCGCCCAG CTCGAGACGC TGGTGCTGAC GGGCACGGCG AACCTTTCGG GGACCGGCAA CGGGCTTTCG AACCTGCTGA TCGGCAATGG CGGCGCGAAC CGGCTGAGCG GCGGCGCCGG CAACGACACG CTGAGCGGCG GCGGCGGGGC GGATCTGCTG ATCGGCGGCG CCGGGCGCGA CAGCTTTGTC TTCAACACCC GCCCCGGGCC CGGCGCGATC GACCGGATCG CGGATTTCAA CGTGGCCGAC GACGTGATCC ATCTGGAAAA TGCGGTGTTC CGCGGCCTTC CGGCGGGGGC GCTGCGCGGG GCGGCCTTTG CCTCCAACCT CTCGGGACAG GCCACCGATG CGGCCGACCG GATCCTCTAT GAGCGCGACA CCGGGGCGCT CTGGTTCGAT GCCGACGGCA CCGGAGGGGG CGCGCGGGTG CAGATCGCGA CCCTCTCGGC GGGGCTCGGC CTGACGGCCG CGGATTTCTT CGTGATCTGA
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Protein sequence | MAILPTFSVT STPVVEGNYL TYTIRLSEPA PDAVSVDYLF RSGTALLDED FYSTAPSGTL VFAPGETVLT LQIRSYNDRL DEIDESFFLE LSDPQGAQFG ANISTLVTAG WVIDDDGVGV NRALAVSNPV VTEAAGGQAL FTLTLSEAFT TDRSFTYTTY DGSARAGADY VARTGTVTFL AGQTEATVAV NLINDGAVEA GETFGLAVTG AHGVPAATGT AEILNDDGPV PVISVEGDRV VEGSYLTYTI RLSEPATDAV SVDYLFRSGT ALLDEDFYST APSGTLTFAP GETVQTLRIR SYNDSLDEID ESFFLELSEP QGARFGANIS TLVTTGWVID NDGVGVNRAL AVSNPVVTEA AGGQALFTLT LSEAFTTDRS FTYTTHDGSA RAGADYVART GTVTFLAGQT EATVAVNLIN DGAVEAGETF GLAVTGAHGV PAATGTAEIL NDDGPVPVIS VEGDRVVEGS YLTYTIRLSE PATDAVSVDY QFRSGTALLD EDFYSTAPSG TLTFAPGETV QTLRIRSYND SLDEIDESFF LDLSDPRGAQ FGGGNRALST GGWVLDNDGV GLNRSVSVGH ATLQEGPGGR VAVFVVELSA ASAERIAIGF QTLAGTARPG SDFAARSGEV VFLPGQTRAE ILIPILDDLV LENTESFSLR LVPPFPSAIS SATPVPVGVA TLLDGTLRGS GGNDRLIGTA NAERIEGFGG NDRIEGRGGN DLLSGGAGND LLDGGGGRDR MVGGTGNDRY IVNHAGDSTI ELAGGGIDTV QSSLSWTLAA NVERLVLTGG AALSGTGNGL ANLLTGNGGA NRLQGLAGND TLNGGGGRDV MIGGTGNDTY ITDGGDTIVE RAGQGVDVVR ASVSYTLGAQ LETLVLTGTA NLSGTGNGLS NLLIGNGGAN RLSGGAGNDT LSGGGGADLL IGGAGRDSFV FNTRPGPGAI DRIADFNVAD DVIHLENAVF RGLPAGALRG AAFASNLSGQ ATDAADRILY ERDTGALWFD ADGTGGGARV QIATLSAGLG LTAADFFVI
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