Gene Mlab_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1645 
Symbol 
ID4795367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1672234 
End bp1674018 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content56% 
IMG OID640100329 
Producthypothetical protein 
Protein accessionYP_001031073 
Protein GI124486457 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID[TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.942552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.656502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG AGACACCCAA GAAATACCTC CTTGGAAACG ACGCTATCGC CCATGCTTGT 
CTCGAAGCGG GCATCGACTT TGTTTCCGGG TATCCCGGGA CCCCGTCATC CGAGGTTGTT
GACCGACTGC GTGCCGAAAA AAACCCCTGG TACTACTTAG AATGGTCAGT TAACGAAAAA
GTCGCGTTCG AAAATGCTCT GGCCGCAAGC TGGTGCGGCC TTCGGTCGAT CGTCACCATG
AAGCACGTCG GTCTGAACGT TGCGGCCGAT CCCCTTATGA CCTCGTCCTA CACCGGGACG
AAAGGCGGCT TCGTCGTTCT TTCAGCCGAC GACCCGTTCG CGCACAGTTC TCAGAACGAA
CAGGACTCGA GGATGTACGC GAAGTTTGCT CAGATCCCGT GCCTGGATCC CTCTTCCGCC
CAGGAAGCGC ATGACTTTGC CAAGTCTGCG TTCGAACTCT CCGAAAAGTT CGCGCTTCCC
GTTCTTCTTC GTCCAACGAC AAGGATCTGC CACTCGAAAG GGGATGTCCG TCTCGGCGAG
CCTTCGCCCT CGCCCCGGAA AGGCGAGTTT GTCAAAAATC CGAAACAGTA CGTCGTGATC
CCGGCACACA CCCGTCCGCT GCATGTCGCC CTCACGAAAA AACAACCCGA GGTCGCAAAA
TATCTGGTGG AGGCAGGTCT CAACTCTGCA GAGATCCGCG GGAAAAAGGC CGTCATCGCC
GGAGGCATCT CCATCTCCTA TGTCGAGGAG ATCATCCCTG ATGACGTTTC GTTCATCAAA
ATCAGCGCAT ATCCGATCGA CCGGAACTGG CTTGCGGAGA TCCTTGCAAA ACACACCGAG
GTTCTCGTTG TGGAAGAGCT TATGCCGGTC ATCGAAGAAG CGGCACTCCA GGCCGCATCC
TCGACGGTCG TTCACGGAAA ACTCGACGGC TATCTGCCTC ACGAGGGAGA ATACTCCCCT
GAACTGATCG CCGGAGCATT TGAAAAGGCA GGTTTTGCGA AAAACACCTA CCCGGTCCCG
CCGGAAGTGA CCCAGGTCGC GGTCCGTCCG CCGATTCTCT GTGCGGGATG TCTCCACCGC
TCGGTCTTCT ACGCAATGAA AAAGGTCTTC AAAGACGGTG TATTCCCATC CGACATCGGC
TGTTATACGC TCGGTCTCCA GCTCGGCGCG GTCGACACGA CGATCTGTAT GGGTGCTTCG
ATCACGGTCG GCTCGGGAAT CGCCCACTCC TGCCCGGGAA CTGACGTGGT CTCCACGATA
GGCGACTCGA CTTTCCTCCA CACGGGTGTG AACGGTCTTA TCAACGCGGT GTACAATAAT
ACGAACCAGA TCGTGATCAT TCTGGATAAC CGGATCACCG CAATGACCGG TCACCAGCCC
AATCCGAACA CCGGTCTGAC CGCGACCGGT GAGGAGTCGC CGAAGATCTC GCTCGAAGAA
CTTGCGAGAG CCTGTGGTGT CGCGTATGTT GAATCGGTCG ATCCATATGA TCTGACCTAT
CTTCTTGCCA CTCTCCGGGA AGCAAAGGAA AAACCCGGCG TCAAGGTCAT CATCGCCAAA
CAGCCCTGCG TTATCATGAA CAAACGGCTC GGGATCAAAA GAAACCGGTA TGTCGTGGAT
GCAGAAGCTT GTACGAAATG CGGGGCATGC CTGAGGTATG GATGCCCGGC GATCGAGACC
GATGAGACCG GCGCTGCCAA GATCACCGCT CTTTGTACCG GCTGCGGCGT CTGTGCGGAT
ATCTGTCCAA CCGGCGCGAT CCACCGAGGA GGTGCGAGAC AATGA
 
Protein sequence
MAEETPKKYL LGNDAIAHAC LEAGIDFVSG YPGTPSSEVV DRLRAEKNPW YYLEWSVNEK 
VAFENALAAS WCGLRSIVTM KHVGLNVAAD PLMTSSYTGT KGGFVVLSAD DPFAHSSQNE
QDSRMYAKFA QIPCLDPSSA QEAHDFAKSA FELSEKFALP VLLRPTTRIC HSKGDVRLGE
PSPSPRKGEF VKNPKQYVVI PAHTRPLHVA LTKKQPEVAK YLVEAGLNSA EIRGKKAVIA
GGISISYVEE IIPDDVSFIK ISAYPIDRNW LAEILAKHTE VLVVEELMPV IEEAALQAAS
STVVHGKLDG YLPHEGEYSP ELIAGAFEKA GFAKNTYPVP PEVTQVAVRP PILCAGCLHR
SVFYAMKKVF KDGVFPSDIG CYTLGLQLGA VDTTICMGAS ITVGSGIAHS CPGTDVVSTI
GDSTFLHTGV NGLINAVYNN TNQIVIILDN RITAMTGHQP NPNTGLTATG EESPKISLEE
LARACGVAYV ESVDPYDLTY LLATLREAKE KPGVKVIIAK QPCVIMNKRL GIKRNRYVVD
AEACTKCGAC LRYGCPAIET DETGAAKITA LCTGCGVCAD ICPTGAIHRG GARQ