| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1589 |
|---|
| Symbol | |
|---|
| ID | 4794407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1620107 |
|---|
| End bp | 1620901 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640100275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001031019 |
|---|
| Protein GI | 124486403 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3503] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000654588 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00067208 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTACATGG ATGACGTCTG TCCCGCCCCG GTGAAGGAAC GGTACTGGGA AATCGATGCG
ATACGCGGTT TTTCGCTTCT GGCGATGATT GCATTCCACA CCGTCTTTCT CCTGGGCGTT
TTCCACATCA TCAATGTGGA TGTCTGGCTT GGACTTGGGG TCTATCTGCC GCTTGGGACA
AGCGTTTTCG TTATAATATC CGGGACCTCC CTGATCCTTC GCCACGGCCG GATGCTCGAT
AAACCGCGCC GGGCCTATTA TATGGCTATA CTGAAACGCG GGATAGAGAT CATGCTGATC
GGGCTTGGGG TCTCCGTTAT TGCGTCCCTT TTGATTCTGG TGTTCATCAA CGACGGAAGA
TATGTGTACT TCAACTTCCT GCAGATGATG GGTCTCTCCA TGATCCTGTG CATCCCGTTT
TTACGATTCG GGAAATGGAG CCTGATCCCT GCGGTATCGT TCATCCTGCT CGGTCTCTTT
CTCGAAACGA TCAAAGGACC CGCCTTGCTG ATGGTTTTCG GGATCCTGCC GCCGGATTTC
TATCCGCGTG ACTTCTTCCC CGTTTTTCCC TGGGTCGGCG TTATGCTGCT TGGCGTTTTC
CTCGGCTCTC TTCTGTATCC AAACGGGATC CGCAGGTTCA ATCTCCCCTC GGCGGGTAAG
ATCGGCCAGA GTCTTGCACT TATCGGCAGG TATCCTCTCG AGATATATCT GGCCCATATC
CCGGTGATTG GGTCCGTCAT TCTCGTGATC GTCGTAGTTT CCGGGATGCT CGGTTGTCCC
ATCGGGCATC TCTGA
|
|---|
| Protein sequence | MYMDDVCPAP VKERYWEIDA IRGFSLLAMI AFHTVFLLGV FHIINVDVWL GLGVYLPLGT
SVFVIISGTS LILRHGRMLD KPRRAYYMAI LKRGIEIMLI GLGVSVIASL LILVFINDGR
YVYFNFLQMM GLSMILCIPF LRFGKWSLIP AVSFILLGLF LETIKGPALL MVFGILPPDF
YPRDFFPVFP WVGVMLLGVF LGSLLYPNGI RRFNLPSAGK IGQSLALIGR YPLEIYLAHI
PVIGSVILVI VVVSGMLGCP IGHL
|
|---|
| |