| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1554 |
|---|
| Symbol | |
|---|
| ID | 4794970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1588935 |
|---|
| End bp | 1589675 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640100241 |
|---|
| Product | tetrahydromethanopterin S-methyltransferase subunit A |
|---|
| Protein accession | YP_001030985 |
|---|
| Protein GI | 124486369 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A |
|---|
| TIGRFAM ID | [TIGR01111] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A
[TIGR01149] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.139393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0000615765 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATA AAAAATCACC AGCAAATGGA TGGCCGATCA TTCAGGGAGA TTACCACACC
GGTGATGCAA ACAGCCCAGT CGCTGTAATC ACCATGGGTT CCCACCTTGA TGAAGCCGGA
ATCTGTGCCG CAGGTGCAGC TCTTGCAGGT TCCTGTAAGA CTGAAAACCT CGGTATTGAG
AAAGTTGTTG CAAACGTCAT TTCAAACCCA AACATCCGGT TTGTTCTGCT TTGTGGTACT
GAAGTTAAGG GTCACCTTTC CGGTCAGTCC ATCGAAGCAA TGCACAAGAA TGGAGTTGAA
GGCGGAAAGA TCGTCGGTTC TACCGGTGCT ATTCCGTTCC TTGAGAACTT GACGGCAGAA
CACATCAAAC GTTTCCAGGA ACAGATTGAA CTCGTTAACA TCATGGAGAC CGAAGACATG
GGTCAGATCT CCGCAAAGAT CAACGAGCTC AAGGGACGTG ATCCTGGAGC ATTCGCTGCT
GACCCCATCG TCATTCAGTT AACTGATGAT GCCGGCGGAG CAGAAGGCGG TGCAACGGTT
GCAAGCGCCA ACCCCCAGTT CCTCGAGATC GAGAAACGTC TTGATGCAAT CGAGCAAAAG
ATTGAGTTCA CGGACGCAGA AATTGCGATG CGTGTCGGAA GAAAAATTGG CCGTGACATC
GGTATCCTCT ACGGACTTGT AGCAGGTATC ATTGCCTTCC TGGTAATCAT TTACTGGATG
TCAGGGTTAT TATTCATGTA A
|
|---|
| Protein sequence | MADKKSPANG WPIIQGDYHT GDANSPVAVI TMGSHLDEAG ICAAGAALAG SCKTENLGIE
KVVANVISNP NIRFVLLCGT EVKGHLSGQS IEAMHKNGVE GGKIVGSTGA IPFLENLTAE
HIKRFQEQIE LVNIMETEDM GQISAKINEL KGRDPGAFAA DPIVIQLTDD AGGAEGGATV
ASANPQFLEI EKRLDAIEQK IEFTDAEIAM RVGRKIGRDI GILYGLVAGI IAFLVIIYWM
SGLLFM
|
|---|
| |