Gene Mlab_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1552 
Symbol 
ID4795048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1585642 
End bp1587792 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content51% 
IMG OID640100239 
Producthypothetical protein 
Protein accessionYP_001030983 
Protein GI124486367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.937373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000146209 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTGTCC GTGAGGGGAA CCTAACACAG CAGTACTTCT GCGATTATCT GACATTGTTT 
GCAGGTGATG CATCCGCAAA GGAATCAGGT GAAGAAATTG TTTTGTCCAA TCTGTTTCTG
CATCGAATGA GTGTCGATGG CGGATTTCAT GCAAGAGTTC TCTCGGCAAT TCTCGGACAC
GAATCAGACC GATTCCTTCT CCTCAGCCTT TTCAAAGAAG TATCAGACGA AGAATACGCT
CCTCTTCCAC TTGATGAATG GCTGAAGTCA GAGTATAGTT CCGCAGTAAA TAACGCTGAC
GTGAATCGGA AAATCGCTAT CGCTGCTCTT CTTCGTTCTC AGATATCCGG CACAAACAAG
GCTGCAGAGA TCGTTTCCGC GTATGGAAGT CAGTACCCGG AGAGCTGGTG GCAGTTTCAA
ACCCGCCGCC TGACCGTGGA AGAAATCGAA AACCCGGATA TGTATTTCGG CGTCGGCCGT
CGGCCGTTCT GGCATGCATT TCCTCTCGAT GAATATGCTG CCGTACTTGG GGGTGCCGAA
ACGCTCCCGC CTGAGATCAT TTACGATATC ATCATCTGCG TTGCCGGAGC CTGGTTCTCC
ACACTGACCC GTGAAGAAAA GATCATCTGG CTGAATATGC CAAGGACAAC GCCCGATGAA
TGGGCAAAGT TTGCGGCCCC CCTGCTGACC CTTGAGAAGC CGGGTCCTGC ATTATCCACG
GCAAACTGGC TGTATGCTTC AGGAAATCAT GATGCCGCTC TTGATCTGTA CGCAAACATC
ACGCTTGCTT TCCCGCAGAC ACCGGTCGAA AAACCGGCCT TTGAACTCAT GGGCGCTATT
CTGTCCGAGT TCGGCGACTT CGACTATGCC TTCGAATCCT ATAAAAGCGC CTTCCTTCTC
GCGAGAAACG AAGGTCCCTA CGAGACCGCG GTTGGGTTGA AAAATCTCTG CGAAGTTGGA
GATGATCTGG GGGAGGATAT GCGGGATTAT TACATCCGTA TTGCGTCGAT CGCAGAAGAA
CTCTCCCCTG ACGACCGGGT GAGGCTATAC TTCGATCTCG CTTCGTCCGC CAGAAAAAAA
TACAATTATC TCGATGAGTA CGCCTACCTA GAACGCATCA TAGCAGAAGA AGGCGCCGAG
GAACCGTTCT TTTCCAGAGC GATGTCCCGG ATCTCCGAGA TGAATCTGGC ACTGGACTTT
GATGGAAAAC CCGACGATTC CGTTCTTCGG GAAAAAGATA TCCGAGAACA GGCGGAGATT
CTGGCTGCAA GAGGGGATGC CGCCTATTTC GGCTTCGATC CCGTCTGTGC TTTGTTCTGG
TATAACAGAT CGGATGCAGT GAGCGGTGAA AACTCCTCCG CAAAAAAGTT CCAGGCGGCC
GTCGCTGCAG GTTTATACAC TGAAGCAAAA GAGTATGCCA GCACGCCTGC AGAAAAAGTC
ATGGTCATGA TTATGGGAGA TACGCCGGTA CATATCGCGG CCCGCGAACT TCACACAGCA
GTCACGGAGG CATGGAAAGC CGGTGCTGAT ATCCTGCCGG TTGTCAACCC GGTTCTGACA
ATGCTTTCCC GCGAAGACCG AATGCTGGTC AGCGATATTC TCACTGACCG CTCGACCCGT
GATGACGAAA AGGCGCTGGT ATGTTCCGGT ATTGGGGATT GTTATATCTC CCTTGGAATG
TCGGACGAAG CACGTCAGAT GTTCCGTCTT GCTCTTCGCG CCAACCCCTC CACTCCGGTT
CGTGCCCGAA TATTTTCAGA GATCGGGCTA CTGGAGTATG AAACCGGCAA TTATGATGCA
TCGTCGGAAG CGTATCTATC TGCATTGAAA ATGAACGAAC GGTTCCCGGC AGCATGGGCG
GGTCTTGCCA AGGCATGCAT CTGTCAGGCA AAATATCCGG AGGCTTTGGC AGCACTTGAA
AATGCTATCA GACATCATCC AGTCAACACC ACTTATCAGG ATATGCGTAA AGCCGTTTTG
GCAGTGATCG CTCATCCGGT CGATGAAACG GCCGACCGGC TTTTTACTCT CAATGACGCA
GCAGGACTGC CTGCAGCGGC AGCTCTCTAC TCGGAAAAAT CGCCGTCTGG CTTTAAAAAA
GAGGCATGGG ACGCCGTTTC CGTTGAAGAT GTCTTAAAAT ATAGAAATTA A
 
Protein sequence
MRVREGNLTQ QYFCDYLTLF AGDASAKESG EEIVLSNLFL HRMSVDGGFH ARVLSAILGH 
ESDRFLLLSL FKEVSDEEYA PLPLDEWLKS EYSSAVNNAD VNRKIAIAAL LRSQISGTNK
AAEIVSAYGS QYPESWWQFQ TRRLTVEEIE NPDMYFGVGR RPFWHAFPLD EYAAVLGGAE
TLPPEIIYDI IICVAGAWFS TLTREEKIIW LNMPRTTPDE WAKFAAPLLT LEKPGPALST
ANWLYASGNH DAALDLYANI TLAFPQTPVE KPAFELMGAI LSEFGDFDYA FESYKSAFLL
ARNEGPYETA VGLKNLCEVG DDLGEDMRDY YIRIASIAEE LSPDDRVRLY FDLASSARKK
YNYLDEYAYL ERIIAEEGAE EPFFSRAMSR ISEMNLALDF DGKPDDSVLR EKDIREQAEI
LAARGDAAYF GFDPVCALFW YNRSDAVSGE NSSAKKFQAA VAAGLYTEAK EYASTPAEKV
MVMIMGDTPV HIAARELHTA VTEAWKAGAD ILPVVNPVLT MLSREDRMLV SDILTDRSTR
DDEKALVCSG IGDCYISLGM SDEARQMFRL ALRANPSTPV RARIFSEIGL LEYETGNYDA
SSEAYLSALK MNERFPAAWA GLAKACICQA KYPEALAALE NAIRHHPVNT TYQDMRKAVL
AVIAHPVDET ADRLFTLNDA AGLPAAAALY SEKSPSGFKK EAWDAVSVED VLKYRN