Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1540 |
Symbol | |
ID | 4795611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 1574168 |
End bp | 1574971 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640100226 |
Product | hypothetical protein |
Protein accession | YP_001030971 |
Protein GI | 124486355 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000578843 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000022178 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA CACAGGAAGA AGCGGTTTCA ACGGTAATTG CTATGATGCT GATTCTGGCA ATTCTTTCAA CCTGCATAGC GGTGTATACG ACAACCTACG TTCCCGGACT AAAACAACAA TCTGAAATTA TCCACAGCGA GGATGTAAAA CTCGTCTTTG ACAGATTTGC ATCGGATGTA GATAATATGT ACAGTCTTGG AAAACCAGCG CAGTTTACCG AGACATTTGC ACTTGGAGGA GGGAATATTC TTCTCTCGCC GGTAAAATCG AGTGGAACCG TTGAGGCAGA AAATTACGTA ATCGGAACGC TCATAATTCC GGGAAAACCC GATTATACAA TAACACAGGT GAATCTCACA TACGCTCCGT CATTTACTTC CTGGGAAAAA CAGGGATATG CTTATGAAAA CGGTGTTGTA TGGATCACCA AAGATACCAA AAGAACACCG GCATCCCAGA CGATACTAAC AATAGAAGAA GGAATCTCCA GAGAAGAAAG CATTATAGGA GATAGGATTT CCGGGAAATA CATCACCATA GCAACCGACG GAAACAACAA TGCCACGGTA ACGATACCAA AGATGAGCAT TACTGAGAAA AACAGTATGA CCGGCAGCGG GAATGCAAAC ATTCTGATGA ATGCGTCAAT TACGCCGATT GCAGACATAC AGCTTGCAGC AGGAGAATGT ATCGAAATTT TCGACACAAA CAGCACTTCG GTTTTCAGAT ATCCCGAAGT ACCGAGTTCG AGTAATATGA ATCTGAGCGT CAGATGGCTG AATATAACGG TGAGTGCAGA ATGA
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Protein sequence | MKKTQEEAVS TVIAMMLILA ILSTCIAVYT TTYVPGLKQQ SEIIHSEDVK LVFDRFASDV DNMYSLGKPA QFTETFALGG GNILLSPVKS SGTVEAENYV IGTLIIPGKP DYTITQVNLT YAPSFTSWEK QGYAYENGVV WITKDTKRTP ASQTILTIEE GISREESIIG DRISGKYITI ATDGNNNATV TIPKMSITEK NSMTGSGNAN ILMNASITPI ADIQLAAGEC IEIFDTNSTS VFRYPEVPSS SNMNLSVRWL NITVSAE
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