Gene Mlab_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1379 
Symbol 
ID4795264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1403619 
End bp1404347 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content49% 
IMG OID640100063 
Producthypothetical protein 
Protein accessionYP_001030812 
Protein GI124486196 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.100757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0567681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAG TAGGCATCTC CACAAATTGC GTAATGGATC TGCCGCTTGA ACGGGCACTC 
ACCATACTGG AGCCGCTCAC ACATCTTGTG GAGATCCAGT GCGATGCAAA TCATTCTCTC
TTTCGACATG CATCCGTTCT GGATAAATTC GATCTGCGTT ACACGATTCA TGCACCGACT
GCCGACGGGA ATATTGCCGA ATCGTTTGAG CCGATCCGCA AAGCAAGCAT CGCGGTGATT
AAAGAAACTG CAGAAATCGC AGACTTGGTG GGCGCGAAAA AACTGGTGAT CCATCCGGGA
TTCTGCCTTG ATCCAACATG CAGGAAAGCG TCAGTCTCTG CTCTGCACAG ATCGATTCAG
GAGCTTGGCG ATCTTCAGGA GGAGTTCTCC GTCCGGTTCG TCATGGAAAA TCTCGGATCG
ATGGACTGCT GCTTTTTTCA AAACACGGAA CTTATCCAGG ACCTTCGTGC AGCGGGACTT
GGACTGGCTC TGGATGTGGG ACATGCAAAT CTTACCGGAA CGCTCGATGC ATTTCTCAAG
GAAAAACCGG ATCATTTTCA TCTCCACGAC AATAAAGGAA TGTGCGATGA ACATGCCGCT
TGCGGAACGG GGATAGTGGA TTTTGGAAAA ATTCTTCCGG AGATCGGAGA TGCGACGCTG
ATCCTTGAAG TTCTCAAACT CAAGGATGTC AAGCCCAGTC TGGAGTATCT GACATCTCTT
GGATATTGA
 
Protein sequence
MNEVGISTNC VMDLPLERAL TILEPLTHLV EIQCDANHSL FRHASVLDKF DLRYTIHAPT 
ADGNIAESFE PIRKASIAVI KETAEIADLV GAKKLVIHPG FCLDPTCRKA SVSALHRSIQ
ELGDLQEEFS VRFVMENLGS MDCCFFQNTE LIQDLRAAGL GLALDVGHAN LTGTLDAFLK
EKPDHFHLHD NKGMCDEHAA CGTGIVDFGK ILPEIGDATL ILEVLKLKDV KPSLEYLTSL
GY