Gene Mlab_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1375 
Symbol 
ID4795054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1397022 
End bp1400738 
Gene Length3717 bp 
Protein Length1238 aa 
Translation table11 
GC content46% 
IMG OID640100059 
ProductMoxR-like ATPases-like 
Protein accessionYP_001030808 
Protein GI124486192 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00027114 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0024969 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGTATGA AAAAAATGCG TGAATTTCTC TATTTGTTGT TTATCATCGT CCTGATGATA 
TGTACTATTG GCGTTGCATC TGCAGATGAA CCAACAGGGC CAACGTCAGA TAATGTCAGG
ATGCATATCT CTGTTGATGG AGGCATCGAC AGTACATCTG CTGTACATGA CAACAGATTG
TTTATTGCAA ACTGGAAAAG TATGGACTTC TCCACCACAA ATGCGATGGG AGTTTTCTGT
TTTGATTTAA CCAATGGAGA CCTGATATGG TTCCGGTCCA TCGGGGAAGT GTTGTCCGAA
ATAACGGTTG CAGATGGACA AGTCTTTGCT GGTACAAAAT CAGGAGCATT GTTTTGTCTT
GATGAAGATA CAGGAAATAC TGTGTGGAGT GTGACCGGCA TTACAGCCGG ATATTGGGGT
CTGACAGGGG CCCCTCTCGT GAATGATGGT GTGGTCTATG TTACGAGCCC TACGAAGCAC
CAGCTTATGG GATATGACAC CAGAAATGGC AATCTTGTTT TTCAACGCGG GCTTGGGTCA
AGCGGGGGAA TTATCTTTAC CTCACCAACA CTTTCATCCT CAAACAATCT GCTTGTGATG
GATGATACCG GAATTCTTGA AATATCTCCG GCAAACGATC TGGTTAATTC CTACACACTC
CCATCAGCCA TTACAACCGG CAGTTCGATC GTGGCACACG GGAACGCAGT TTATCTTAAT
GCAAACGGCA TTCTGTACCG AATAAACACG ATCGGAGAAT GGACCGAGGC ATGGAATGTC
TCCACGCTCA CTTCGACCAC ACCTGTCGTA ACCGACTCGG CCGTATATGT TTCCCAGGGA
GGGACCCTGG CAGCATATGA TATTACTTCA GGAGAGGCAC TTGATGGATT TACTACGCAT
GTAAGCGGAG GATCCAGCAG CTATCTCAAT CCAGTGCTTG CGGGAAATAC AATTTATTAT
GCAATGAATG CACATTGCGG AAAAGTTTTT GCAATAAATG CAACAACAGG GGCAGAAGAA
TGGAACTTCA GTCTTCCGGA GAGCGGAAAT CCTGGAGAAG ACTACACATT CTTTGCATCC
TCTCCAGTAG TGTACGGTGA AAATCTGTTC ATCGGTTCAG AAGGAGCTGG ATTTTATGTC
ATTGGAGAGG GGGATCTTAT CGAAATCGAC AAAACAAATG CCGCTGATCA GCCATATGTT
CCCCCCGCCC CAATGACAGT GCTCTACGAG GGAACAGTAC GTCTGGTGAA TACCTCGGAA
GGAGTGACGG TTAAAGATGC GCTCGATGCG GCAGTGTCGG CAGGAGGGTT CACCTATAAT
CTCACCGAAT ATGATACGAT AAAAGACATC AATGGAATAG AAAATGCAGA GGACTGGTCG
CATTCGTGGA TGACCACATA CTACAACAAT AACGAAATAC CGGTTTACAG CGTGCTTGAC
CCGGTAGTCG CCGGAGCCAC CATTTCACTT CATTATGATG AGCTTGATGC ATCGTGGAAT
GTTGTAGGAA CCCAGTATCT CGTGAATGTA ACCGTAGGGA ATATCAATGA ACCAGCACCG
TGGACAGTCA TCTACGATGA CACGATCGAT CTCACAAACA CATCCACGGG AGTGACGGTA
AAGGATGCGC TCGATGCAGC AGTTTCGGCA GGAGGGTTCA CCTATAACCT CACCGAATAT
GATACGATAA AAGACATCAA TGGAATAGAA AATGCAGAGG ACTGGTCGCA TTCGTGGATG
ACCACATACT ACAACAATAA TGACACCTCG GTCTACAGCG TGCTTGACCC GGTAGTCGCC
GGAGCCACCA TTTCACTCCA TTATGATGAG CTCGACGCAT CGTGGAATGT TGTCGGAACC
CAGTATCTCG TGAATGTAAC CGTAGGGAAT ATCGATGAAC CAGCACCGTG GACGATCATC
TACGATGACA CGGTCAATCT GACGAATTCT TCAACGGGAG TGACGGTAAA GGATGCACTC
GATGCGGCAG TGTCGGCAGG AGGGTTCACC TATAACCTCA CCGAATATGA TACGATAAAA
GACATCAATG GAATAGAAAA TGCAGAGGAT TGGTCGCATT CGTGGATGAC CACATATTAC
AACAATAACG AAATACCGGT CTACAGCGTT CTTGACCCGG TAGTCGCGGG AGCAACTATT
TCACTCCATT ATGATGAGTT CGATGCATCG TGGAATGTGA TAGGAACGGA ATATATGGTC
AATGTTACGG TAAACAGCAT TTCAGACCTC AGCATCACAA ATCCATCAAC GATGGTCACG
GGAGCATCTG CTGTCTTTAC TGCCCTCTCC AATTACCCGG GAAATACCAC ATATTCGTGG
GACTTTGGCG ACAATACCAC CGTTGTTGAA ACAAAATCCT CAGGCGTTGC CTCTACTGTT
GATAAAATCT ATACAAATGC CGGGACTAAA ATCATCACCG TAACTGCGGA ATATGATAAT
CGATCAGTAA CAAACAGCGC TGAAATAATT GTAACAACAC CGCCATCAGC ATTCGACGAA
TCCAACAACC TCGAAGCAAA ACTTACCGGG GACTCAATCC CGGACACAAC CCATATCTTC
TTTACTGGGA CAGATGTTAC TAACGCATCA AATGTTACGA TAAGCATCTC CAGATATCAG
AATCAAAGTT CAATTTCCGA TGATGAGTGG CAGAATATTC AGACAAACTA CACCCTACCA
AACTCAAACG AAAAACCTCT CTTCATCTTA GAGATAGACT CGTCAAATGC ATATGGGGTA
AACAACATCC ATCAGCTTAA CAACTACGCC CGCCTTTCCA TTCGTCTTGC CATTGATTAC
GCCAATGCAT CGAACGTGAG TTTCTATCGA TATGTTGACG GCTCGAACGG TTATGAGCAG
CTGCATTACA CGATTGGAAA TGTGGCTCCG GGATGGGTGG AATTCCTTGT AGACATCCCG
GGATTCTCAA CAATCCTTGC AGCAATAGAT GAGATCCCGG CAGATTCCAG AACAACACCG
GTTTCATCAA CGGGACCTGT GGCAAATCTC GCAACTATCA AGTATAAAAC CATATATTAC
GGCACTATCA CCGTTGATCC GGGATCATTC ACCTACACAA CCACAATGGA CGATAAAACA
TTCATCGTAA ACAACCTGAG TGTTTTCGGG ATACTGCATG CATCAGGAAT GAATCTCCAG
ACAAAAGAGT GGCCAGGCGG AATCTATGTT CATTCCATCA ATGGAATCGC TCAGGATGAA
AATCTCAACG GGTGGCTGTA TCAGGTAAAC GGTCTGACAA CAAGCCAGAT GTCAAATAAC
TACATGGTCC ATGACGGAGA TAAAATCGTC TGGTATTATA GTGAGAGTAT GGCGTCAATA
CCGGAGACAA GTCAGTATGC CTACGGATTC ATCGTAAAGG TCAAAGCATC CGCGGTGCCG
CTGCTTAATC TTTCAGCGGC AGAAACGCCG ACAATCAATC TTGGAATGCC TGAGGGCGTC
ACCATCAGCA GTGGGATCCC GCAGAGAATC ACGGTCGACA CCTCAATCAC ACAGGCAGGT
GGGTTTGTCA ACATTACCGA ACACACAATA ATAATTACCG AACCCGGTCT TCAGATGACC
ATCCCAGTAA AGAATCTCAT CAGGAGTGAT GAGATAGTCA CGGCTGAAAT CCAGAACATG
ACTGCAGAAC TTGTACCTGC TGCAGGCAAA ATCAAAACAT CCGGAATAGA GGTGTAA
 
Protein sequence
MCMKKMREFL YLLFIIVLMI CTIGVASADE PTGPTSDNVR MHISVDGGID STSAVHDNRL 
FIANWKSMDF STTNAMGVFC FDLTNGDLIW FRSIGEVLSE ITVADGQVFA GTKSGALFCL
DEDTGNTVWS VTGITAGYWG LTGAPLVNDG VVYVTSPTKH QLMGYDTRNG NLVFQRGLGS
SGGIIFTSPT LSSSNNLLVM DDTGILEISP ANDLVNSYTL PSAITTGSSI VAHGNAVYLN
ANGILYRINT IGEWTEAWNV STLTSTTPVV TDSAVYVSQG GTLAAYDITS GEALDGFTTH
VSGGSSSYLN PVLAGNTIYY AMNAHCGKVF AINATTGAEE WNFSLPESGN PGEDYTFFAS
SPVVYGENLF IGSEGAGFYV IGEGDLIEID KTNAADQPYV PPAPMTVLYE GTVRLVNTSE
GVTVKDALDA AVSAGGFTYN LTEYDTIKDI NGIENAEDWS HSWMTTYYNN NEIPVYSVLD
PVVAGATISL HYDELDASWN VVGTQYLVNV TVGNINEPAP WTVIYDDTID LTNTSTGVTV
KDALDAAVSA GGFTYNLTEY DTIKDINGIE NAEDWSHSWM TTYYNNNDTS VYSVLDPVVA
GATISLHYDE LDASWNVVGT QYLVNVTVGN IDEPAPWTII YDDTVNLTNS STGVTVKDAL
DAAVSAGGFT YNLTEYDTIK DINGIENAED WSHSWMTTYY NNNEIPVYSV LDPVVAGATI
SLHYDEFDAS WNVIGTEYMV NVTVNSISDL SITNPSTMVT GASAVFTALS NYPGNTTYSW
DFGDNTTVVE TKSSGVASTV DKIYTNAGTK IITVTAEYDN RSVTNSAEII VTTPPSAFDE
SNNLEAKLTG DSIPDTTHIF FTGTDVTNAS NVTISISRYQ NQSSISDDEW QNIQTNYTLP
NSNEKPLFIL EIDSSNAYGV NNIHQLNNYA RLSIRLAIDY ANASNVSFYR YVDGSNGYEQ
LHYTIGNVAP GWVEFLVDIP GFSTILAAID EIPADSRTTP VSSTGPVANL ATIKYKTIYY
GTITVDPGSF TYTTTMDDKT FIVNNLSVFG ILHASGMNLQ TKEWPGGIYV HSINGIAQDE
NLNGWLYQVN GLTTSQMSNN YMVHDGDKIV WYYSESMASI PETSQYAYGF IVKVKASAVP
LLNLSAAETP TINLGMPEGV TISSGIPQRI TVDTSITQAG GFVNITEHTI IITEPGLQMT
IPVKNLIRSD EIVTAEIQNM TAELVPAAGK IKTSGIEV