| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1296 |
|---|
| Symbol | |
|---|
| ID | 4794711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1323544 |
|---|
| End bp | 1324665 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640099979 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001030732 |
|---|
| Protein GI | 124486116 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1379] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.51711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGC AGTACAACGC CGATCTCCAT TTACACTCCT GTTTTTCGAT GGCGACCTCT
CCCGAGATGG TCCCAAAACA GATACTTGCC GGCTGCCGGA CCAAGGGGAT TCATGTTGTT
GGAAGCGGGG ATGCACTCCA TCCTGTCTGG CGCGGGATGT GGGAACCGTT TCTCGAAAAT
GAGTATGGGA TCACGGTTGT TCCCCAGACC GAGGTTGAGG ACTCTTCCCG TGTCCATCAT
CTGATCTTAA TGGAAACCTT CGACCAGTTT GCTGAACTCC AGCAGAGGTT TACACCGGCA
TGCGGACATC TTACGACTGC GGGCCGCCCT CATCTCCATC TTTCCGGGGA AGAGATCGCC
CGGGAGGTTC ATGACCTTGG CGGGATGATT GGGCCGGCGC ATGCCTTCAC GCCGTGGACT
TCTCTTTTTG CCGCGTTCGA TTTGCCTTCT GAATGTTACG GCGAAGAGAG CATCGAGTTC
TGCGAGCTGG GGCTTTCCGC CGATTCATCC TACGGGGCCG GCATCGAAGA GTTTGCCGGC
GTTCCTTTTC TTTCGAATTC GGATGCCCAC AGTGCCGCGC CTGAGAAACT CGGCCGCGAG
TTTACGCGCC TGGAGATGTC GGCTTCAACG GTTCCTGCGG TTCTCGAGGC GATAAAAAAA
GGTTCGGTCG TGCTGAATGC CGGTTTTTTC CCGGAAGAAG GAAAATACAA CCGAACCGCC
TGCACGCGGT GTTATGCGCA GTTCTCTCTT GCTGAAGCCG AGCGTCTTCA CTGGAAGTGC
CCTGCTGACA AAGGCCGGAT AAAAATCGGT GTGAGGGAAC GCGCAGAACA GCTTTCCACG
ATCCCTCCAA CGGTCCGTCC GCCCTATCTG AAGATGGTGC CGCTTGGCGA AGTCATTGCC
CGCGTTCTGG GTGTTTCCTC GCCAAACACT AAAAAAGCAC GAGCGCTTTA TTCTGCATTT
ATCGAGGCAT TCGATAATGA GATCGCAATT CTCCTTGAAG TGCCGCGTGA TGAACTGGCC
CGCATATCGC CAGAGATAGC CGGAGCCGTT TTATCGATGC GGGAAGGCCG CGTCACGCTG
ATTCCCGGCG GCGGCGGCCG CTATGGATCT TTTACCCTTT GA
|
|---|
| Protein sequence | MSMQYNADLH LHSCFSMATS PEMVPKQILA GCRTKGIHVV GSGDALHPVW RGMWEPFLEN
EYGITVVPQT EVEDSSRVHH LILMETFDQF AELQQRFTPA CGHLTTAGRP HLHLSGEEIA
REVHDLGGMI GPAHAFTPWT SLFAAFDLPS ECYGEESIEF CELGLSADSS YGAGIEEFAG
VPFLSNSDAH SAAPEKLGRE FTRLEMSAST VPAVLEAIKK GSVVLNAGFF PEEGKYNRTA
CTRCYAQFSL AEAERLHWKC PADKGRIKIG VRERAEQLST IPPTVRPPYL KMVPLGEVIA
RVLGVSSPNT KKARALYSAF IEAFDNEIAI LLEVPRDELA RISPEIAGAV LSMREGRVTL
IPGGGGRYGS FTL
|
|---|
| |