| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1041 |
|---|
| Symbol | |
|---|
| ID | 4796041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1051819 |
|---|
| End bp | 1052565 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640099711 |
|---|
| Product | nitrogenase iron protein subunit NifH |
|---|
| Protein accession | YP_001030477 |
|---|
| Protein GI | 124485861 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
|---|
| TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.343788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCATTTTA TGGTAAAGGC GGAATCGGAA AATCAACCTG TGTCTCAAAT
ATTTCTATGG CTCTCGCCGA GCAGGGATTC ACGGTCATGC AGATCGGCTG CGATCCGAAA
GCAGATTCAA CGAGAAATCT AACTCACGGA GATTTGATCC CATCTGTTCT CTCAGTAATA
AGGGAGAAAA AGAATGATAT TTGTTTGGAA GATATCGTTT CCTGTGGATC AGGTGGAGTA
TTGTGTGTAG AGGCGGGGGG GCCAAAACCC GGGTCAGGTT GTGCAGGTCG CGGCATTATT
ACTGCTTTTG AACAATTGGA GGAGCTTGGA GCTTATACTA CCTATCATCC AGATATTATT
CTCTATGATG TTTTAGGAGA TGTGGTCTGT GGAGGATTTG CCCTGCCGAT ACGCCAAGGA
TATGCCGATG AGATCTGTAT TGTGACATCC GGCGAGATGA TGTCCTTGTA TGCCGCGGAT
AACATCTCTC AGGCGGTGAA TAATTATTCA AAGCGTGGAT ATGCGGCATT GAAGGGACTC
ATCTACAATG CAAAAAATAT TGAAAATGAA GATGAGATTG TGGAAAAAGC GGCTGCAGAA
ATGAATACAA AGGTGTTGTC CAGGATTAAC CGTGACCCGA TTGTCCAAAA GGCTGAAAAT
GCTGGTATGA CTGTTGTGGA ATATGCACCG AATTCATCTC AAGCAGATTT GTATAGAAAA
CTAGCAGGAA TTTTACTTGA GGATTAA
|
|---|
| Protein sequence | MKKIAFYGKG GIGKSTCVSN ISMALAEQGF TVMQIGCDPK ADSTRNLTHG DLIPSVLSVI
REKKNDICLE DIVSCGSGGV LCVEAGGPKP GSGCAGRGII TAFEQLEELG AYTTYHPDII
LYDVLGDVVC GGFALPIRQG YADEICIVTS GEMMSLYAAD NISQAVNNYS KRGYAALKGL
IYNAKNIENE DEIVEKAAAE MNTKVLSRIN RDPIVQKAEN AGMTVVEYAP NSSQADLYRK
LAGILLED
|
|---|
| |