Gene Mlab_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1005 
Symbol 
ID4794915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1005587 
End bp1006948 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content52% 
IMG OID640099669 
Producthypothetical protein 
Protein accessionYP_001030441 
Protein GI124485825 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.407756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCT TCGCAACCTC CATGGGGGCT TTCCTCAATC CTATGATCGC AACGATGGTG 
ATCCTTGCCC TCCCGGCGAT CGGACTTGAG TTTGGGGTTT CGGCGCGGGA TCTTGGTTGG
ATGAGCACGG CATTTATCTT GGCAACTGCC ATTCTTTTGG TACCGGCATC CCGTCTTGTC
GACAGTATCG GATACAAAAA ATCCTACATC ATCGGCGGCA TCGTTGTCGT AATCACCTGT
TTCTTCTCGG TGTTTGCACC AGATTACACT ACCCTGATCA TTTTACGAAT CATTGCCGGG
ATGGGATCCT CATTTATTAT GATAACCGGT CTTGCGATCC TGACAAGGGT GTATCCGGCA
AATAAACGCG GTATGGTGAT TGGAATCAAC ACGGCAATGG TCTATGTCGG TGCATCCATG
GGTCCGATCA TCGGCGGATT TTTGACTGAA TACACCGGAT GGCGCAGCAT ATTCCTGCTG
ATGATCCCGC TTCTGCTGAT ATCTGCAGGC CTTATGATCA TCTTTCTCAA ACAGGAGTTT
AAAAATCCAG GTAAATCCTT CGATTTCAAA GGCACGATCT TATACGGAGC AGCAATATTC
TGCACGATGT ACGGTCTTTC CACCATTACC GACACCGGAT CCCTCTATCT CGCAATACTT
GGAGCGTGCC TGATTGTCAT CTTCATGTGG TACGAACGAA AAGTTCCAGA ACCGGTTCTT
CATGTGGATC TGTTCTTCAA AAACAAACGG TTCGCACGTT CATCCTACAC GGCACTTTTG
AACTACGGCT GCACGTATGG GGCGGTCTAT ATGGTGAGTC TGTATCTCCA GTCGGTCGGT
GCGCTGAGTG CGCTCGAGGC AGGATTCATT ATCTTCTTCC AGCCTCTCAT TCAGGCGATA
ATGACCCCGA TCGCAGGAAA ACTCTCCGAC CGGTTCGACC CGAGATACCT CGTCACTTTC
GGCATGGCGC TCTCGGCAAT AGGCGTAACC CTGCTTGCCG GACTCGGGCT TACCGCCGCC
GTATCCTACA TCGCGATCAC GCAGGTGTTT ATCGGGCTTG GATCAGCTCT CTTCTCGGCG
CCGAACACCA ATGCGATCAT GAGCTCGGTC CCGCAAAATG AATACAGTTC GGCATCGAGC
ATCGTCGCAG TGATGAGGCA GCTTGGCATG ATCCTGTCGA TGGCCGTTTG TATGGCAGCG
ATATCCGTCT TTGTCGGCGG TCTGGATATG CTTGGCCCCG ACATGTATCC CGAGTTCGTC
CAGGCCCTGC AGATCTCGAT GCTGGTATGT GCAGGCCTTG CCGTGATCGG AATCCTGTTC
TCATGGTTCC GTGGAAACGC ACCAACGGGG GCAGACGCAT GA
 
Protein sequence
MILFATSMGA FLNPMIATMV ILALPAIGLE FGVSARDLGW MSTAFILATA ILLVPASRLV 
DSIGYKKSYI IGGIVVVITC FFSVFAPDYT TLIILRIIAG MGSSFIMITG LAILTRVYPA
NKRGMVIGIN TAMVYVGASM GPIIGGFLTE YTGWRSIFLL MIPLLLISAG LMIIFLKQEF
KNPGKSFDFK GTILYGAAIF CTMYGLSTIT DTGSLYLAIL GACLIVIFMW YERKVPEPVL
HVDLFFKNKR FARSSYTALL NYGCTYGAVY MVSLYLQSVG ALSALEAGFI IFFQPLIQAI
MTPIAGKLSD RFDPRYLVTF GMALSAIGVT LLAGLGLTAA VSYIAITQVF IGLGSALFSA
PNTNAIMSSV PQNEYSSASS IVAVMRQLGM ILSMAVCMAA ISVFVGGLDM LGPDMYPEFV
QALQISMLVC AGLAVIGILF SWFRGNAPTG ADA