| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0706 |
|---|
| Symbol | |
|---|
| ID | 4795023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 680054 |
|---|
| End bp | 681304 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640099366 |
|---|
| Product | glutamate dehydrogenase (NAD/NADP) |
|---|
| Protein accession | YP_001030145 |
|---|
| Protein GI | 124485529 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.110428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGG TAAACCCGTT TGAAATGGCC CAGCATCAGC TTATGGATTG TGCAAAAATC
CTCAAGCTCG ACCAGGGCGT TGTTGATATC CTCATGCAAC CGCAGAGACA GATTCAGGTA
TCTATCCCCG TCAAGATGGA CGACGGCACC ACCCGGGTTT TCCAGGGATT CCGTGTACAG
TACAACAATG CACTCGGACT CTATAAGGGA GGAATCCGGT ATCACCCTGA AGAGACGATC
GACACCGTTC GTGCTCTCTC AGCATGGATG ACCTGGAAAT GCGCAGTACT GAACCTTCCG
CTCGGCGGAG GAAAGGGCGG TATCATCTGC AACCCGAAGG AAATGTCCAA GGGCGAACTT
GAACGCATGA GCCGCGGTTA TATCCGTGCA ATCTGGAAGA ACATCGGTCC CGACACTGAT
GTCCCGGCAC CGGATGTATA CACCGACGGT CAGATCATGG CATGGATGAT GGATGAGTAC
TCCACCATTC AGGGCAAGAA CCAGTTCGGT CTTCTGACTG GCAAACCACT CGTTATCGGC
GGCTCACTCG GCCGCGGTGA CTCCACCGCA AAAGGCGGTC TGTTCACCCT CCGTGAAGCA
GCAAAAGAAC TCAACATTGA CCTGAAGACT GCAAAAGTCG CAATCCTCGG ATACGGAAAC
GCAGGTGCAT TCGCATCCAC GCTCGTCCAG GAAATGTTCG GCTCCAAAGT CGTCGCAGTC
ACCGATTCGA AAGGCGGTAT CTACGATGAG AACGGACTTG ACATCGCAGC AGTCGCAGCC
CACAAGGCAC AGACCAAATC CGTCGTCGGC TACAAAGGTC TCAAGACCCT CACCAACGAT
GAAGTCATGG CACTCCCTGT TGATGTCATT GTCGCCGCAG CACCCGATGA GGGAGCAATC
AACGAGAAGG TCGCCCCGAC CGTCAAGGCA AAGGTCATCT GCGAACTCGC AAACGGCCCG
ACCACTCCGG AAGGAGACGC AATCCTCTAC AAGAACGGCG TTCACGTTAT CCCCGACTTC
CTGTGCAATG CAGGCGGAGT AACTGTATCT TACTACGAGA TGGTCCAGAA TATGTATATG
CACTACTGGA CTCTCGACGA CGTCTACGCA AAACTCGATG CAGCAATGAC CAAGTCCTAT
CACGAAGTCC TGAAAGCATC CAAAGAATAC AAGATCAACA TGCGTCAGGC AGCATACGTT
GTTGCAGTCT CCCGCGTAGT TGAAGGTATG AAAGTCCGCG GCTGGGTCTA A
|
|---|
| Protein sequence | MSKVNPFEMA QHQLMDCAKI LKLDQGVVDI LMQPQRQIQV SIPVKMDDGT TRVFQGFRVQ
YNNALGLYKG GIRYHPEETI DTVRALSAWM TWKCAVLNLP LGGGKGGIIC NPKEMSKGEL
ERMSRGYIRA IWKNIGPDTD VPAPDVYTDG QIMAWMMDEY STIQGKNQFG LLTGKPLVIG
GSLGRGDSTA KGGLFTLREA AKELNIDLKT AKVAILGYGN AGAFASTLVQ EMFGSKVVAV
TDSKGGIYDE NGLDIAAVAA HKAQTKSVVG YKGLKTLTND EVMALPVDVI VAAAPDEGAI
NEKVAPTVKA KVICELANGP TTPEGDAILY KNGVHVIPDF LCNAGGVTVS YYEMVQNMYM
HYWTLDDVYA KLDAAMTKSY HEVLKASKEY KINMRQAAYV VAVSRVVEGM KVRGWV
|
|---|
| |