Gene Mlab_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0625 
Symbol 
ID4795062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp601366 
End bp603846 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content53% 
IMG OID640099285 
Productmethyltransferase type 11 
Protein accessionYP_001030066 
Protein GI124485450 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID[TIGR01243] AAA family ATPase, CDC48 subfamily 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAA TCACACTCAA GGTGGACAGT GCCTACCCGG AAGATCAGGG GAACGGGAAG 
GCACGTCTTG ACCCATCAGC TATGCAGGCG CTGAACGTCA GTCCTGGCGA TTTGGTCAGG
ATCACCGGAA AAACCTCCAC CGTTGCCAAA GTATGGCGTT CGTTTGAAAG CGACTGGAAT
ATGGAAAAGA TCCGGATCGA TAAATATACC CGGGCAAATG CCAGCGTCAA TCCGGGAGAC
CGGGTAACCG TGGAAAAAGT CGAGGAGGAG ATCCCGGCCA CATCGGTTAC TCTTGTATCG
CCGTCGGAAA TATCAGCAGC ATTCCCCGAT GAAGAGGATG ATTATCTTAT ATCGCTCATC
AACTTCCCGG TGTCCTTGGA TGACATCATC CCGATAAAAA CTTTCCACCC GGGACCCCCT
CTTGAGTTCA AGGTATCCGC AATTGAACCG GAAAATGCCT GCATACTCAA TAAAATGACG
GAGCTCGTCT TCAATGACGA TGATGAGTTC GATGGCACCA AAGCAATAAC CTATGAGGAC
ATCGGCGGAC TGAAAGGAGA ACTGAAACGC GTTCGGGAAA TGATCGAACT CCCGATTCGT
CACCCAGAAC TGTTTGAAAC GATGGGGATC GAACCGCCGA AGGGCGTCCT TCTTTACGGG
CCGCCGGGAA CCGGTAAAAC GCTGATCGCG AAGGCCGTAG CAAATGAAAG CGGAGCACAC
TTCATTTCTA TCGCGGGTCC CGAAATCATC TCCAAATACT ACGGTGAGTC GGAACAGAAA
CTCAGAGAGA TTTTTGAAGA GGCAGAGGAG GAGGCCCCCT CTATCATCTT CATCGATGAA
CTGGATTCGA TCGCCCCGAA ACGCGAGGAT GTAAACGGCG AAGTCGAGCG GCGCGTGGTT
GCCCAGCTTC TGACTATGCT TGACGGCATT ACGGACAGGG GGCAGGTCAT CGTGATCGGT
GCAACGAACC GGCCCGATGC GATAGATCCT GCACTTCGGA GACCGGGAAG ATTCGACCGG
GAGATCGAGA TCGGCGTTCC AGCCGAAGCA GACAGGATGG AGATCCTCCA GATCCACACA
AAAGACATGC CGTTTGAAGG GATGGCAAAG CTGAAGGAGC TGCGCAGCAG CGAGCCGTCC
GAGACCGTCC TTGAGAAGGC ACTCGCAGAC TACGAAGCAT CGCGGGACAA ACTGCTGTGG
ATGCTTGCTT CGCAGGCAAA AGGGTTTGTC GGGGCAGATC TCGCCGCTCT GGCACGCGAA
GCTGCGATCC GGGCATTACG CCGGCAGATC GATGTGGCGG ACATCGACAA TGAAAAGATC
CCGGAAGAAG TCCTGCGAAA ACTGGAAGTC ACAACGTCGG ATTTCATCCT CGCTTCACGA
GAGGTAGCCC CATCAGCGAT GCGGGAGATC GCTCTGGAAA CCGCAGACGT TTCCTGGACC
GATATCGGAG GAAGCCGGGA CGCGGTTCGC GATGTGCGCG AATCGGTGGA GTTCCCGCTC
ACGAGAAAAG AGGTCTTCGC ACAACTCGGT ATTCGTCCGC CAAAAGGCGT CCTCCTTTAC
GGGCCGCCGG GAACCGGCAA AACCATGATC GCCAAAGCGG TCGCTCATGA AAGCGGCGCC
AACTTCATCG CTGTGAAAGG ACCGGAACTT CTTTCGAAAT GGGTCGGTGA ATCCGAAAAG
GCTGTTCGAG ACATCTTTAA AAAAGCACGG CAGGTCGCTC CTGCGATCAT CTTCTTTGAT
GAGCTCGACT CTTTAACGCC GTCACGCGGC GCTTCCGACG GCAGTCGAAC GACAGAAAAC
GTCCTCAACC AGATCCTGAC GGAGATGGAC GGCATCGAAG AGTTGAACGA TGTGATGATC
CTGGCAGCCT CGAACCGTCC GGATATCATC GACCCGGCAC TTCTCCGGAG CGGACGTTTC
GACAGGCTCG TCTATATTTC AGAACCCGAA GAGGCCGACA GGAAAGAGAT CCTTGCAGTC
CACATGCAGA ATATGCCAAT CGAAGGATCA TCATTCGATG AAGCGGTGAA AGAAGTCTCC
GGGCTGAACG AGGCTTCACT CGAATCTCTG GGCGCAAAGT TTTCCGGAAA ATCCGTAACC
ATCAAACAGA TAAAAACGGC AGCCGGCAAA TATACGAAAG GAACACCTCT CTCCCTTATC
GAAGAGAGAA GACGTCTTGC GGCAGTTTTA CGACAACATG CCGTAACCCT CAGTGATCCG
GAAAAAACAA AACTGATCCG ACAACTTGCA GAAGATACTG CCGGATATGT AGGATCGGAT
CTTGAAGGAC TCTGCCGTGA AGCAGCAATG CATGCACTCA GAAATCAGGC GAACGTTGTC
ACCGCGGACG ATTTTGCCGA AGCGAGAAAG AAGATCCATC CAACAATGAA CGAGCGGGTG
CGAGAATACT ACATCTCCAT CTCGCAGAGA TTCAAAGGCG GACTGCCCAA AGAAGCGCAG
AATCTGATCG AGTACCAGTA A
 
Protein sequence
MPEITLKVDS AYPEDQGNGK ARLDPSAMQA LNVSPGDLVR ITGKTSTVAK VWRSFESDWN 
MEKIRIDKYT RANASVNPGD RVTVEKVEEE IPATSVTLVS PSEISAAFPD EEDDYLISLI
NFPVSLDDII PIKTFHPGPP LEFKVSAIEP ENACILNKMT ELVFNDDDEF DGTKAITYED
IGGLKGELKR VREMIELPIR HPELFETMGI EPPKGVLLYG PPGTGKTLIA KAVANESGAH
FISIAGPEII SKYYGESEQK LREIFEEAEE EAPSIIFIDE LDSIAPKRED VNGEVERRVV
AQLLTMLDGI TDRGQVIVIG ATNRPDAIDP ALRRPGRFDR EIEIGVPAEA DRMEILQIHT
KDMPFEGMAK LKELRSSEPS ETVLEKALAD YEASRDKLLW MLASQAKGFV GADLAALARE
AAIRALRRQI DVADIDNEKI PEEVLRKLEV TTSDFILASR EVAPSAMREI ALETADVSWT
DIGGSRDAVR DVRESVEFPL TRKEVFAQLG IRPPKGVLLY GPPGTGKTMI AKAVAHESGA
NFIAVKGPEL LSKWVGESEK AVRDIFKKAR QVAPAIIFFD ELDSLTPSRG ASDGSRTTEN
VLNQILTEMD GIEELNDVMI LAASNRPDII DPALLRSGRF DRLVYISEPE EADRKEILAV
HMQNMPIEGS SFDEAVKEVS GLNEASLESL GAKFSGKSVT IKQIKTAAGK YTKGTPLSLI
EERRRLAAVL RQHAVTLSDP EKTKLIRQLA EDTAGYVGSD LEGLCREAAM HALRNQANVV
TADDFAEARK KIHPTMNERV REYYISISQR FKGGLPKEAQ NLIEYQ