Gene Mlab_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0584 
Symbol 
ID4795480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp556202 
End bp557365 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content55% 
IMG OID640099242 
Producthypothetical protein 
Protein accessionYP_001030025 
Protein GI124485409 
COG category[S] Function unknown 
COG ID[COG1602] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.183239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000387048 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTTCCC AGTGTGCCGT ATGCAAAGGA AAAGGACTCT GCGGTCTTCC CAGCTGTCCG 
ATAACCCGGC GATTCCACGC ACTGAAAGAC ACGCGGCCCG TTTCTGAATA CATGGGGGCG
TCCCCCTCGG TTTTTGTCGG CAGCTACGGA TACCCGCGGG TCGTCGGCGG GCCGCTTATG
ATCAACGATA CCGACAACCC CCTTGACTGG GTCAGACAGG GTTTTTCCAT CGACGATATC
GTTTCGGTCC GTTCCAGAAC GATACGCGGA GGTTCCGATC TGGATGTAAA GATCCCGGAA
ATCGGCAAGG TCCAGGAGAT CGCCCTTTCG GCTAAACCGC TCGATGTGGA GGTAGCGTTT
GAAAAACCGG TCTCGTTCGA TATCAACTTT GACGGGACCG TAACACCGGT TGGCATGTCG
GGTGCGATGA AAAAACTGGA TGTCATCGAC AATGCCTCGG TATCCCGGAT CGTTGATAGG
TGTACCTCCG ACACCGATCT CAAGGCGACC GAAGCCGCAC GGATAATGTT CGAAAACGGG
ACGGATGTTT ACAAGATCAC GAATCTTTTG ACCGCCGGCC TTCTTGGGGT AAACCGCCGG
GTGGTCCCTA CCCGCTGGGC GATTACCGCC ACGGATGACA TGATCTCCAC TTCGATCAAG
CGCGAGGTCG TAAAAATGCC GCCCCTCCCC GAGTATCAGG TTTTCTGCGG GACACTGTAT
GGAAATACCA TCTGTTTCAT TCTCATCCCG TCAAACGACT GGAGATTCGA GATGCTCGAA
CGCTGGCAGA AGCATTCTCT CTGGTCAGGA GACGAGGAAA CGATCGTTGT CGACGGAGAG
AAGGGTCTAA ACAAATCCAA ATATTCTCCG ATCGCCGGGG CCTATTATTC GGCAAGACTT
GCCGTTCTCG AGTATCTGAA AAGTATCGGG AGGTGTGCAC GCGTTCTGTG CATCCGGGAC
ATTTCCGGTG AGTACTGGGC TCCGCTTGGA ACCTGGGTCA TCAGGGAAGC CGCCCACGAA
TCCCTTTCCC ACCCCCCGGA CAGGGTCGGC ACACTCGGTG AGGCCGTGAC TTCGGCTTCG
CAAAAACTCG GGACCGGTTT TTGGATCCCG AAAATGGGCC TGCTTAAGGA TATCAGACAG
CAGAAGACGC TCTTCGAGTT CTAA
 
Protein sequence
MPSQCAVCKG KGLCGLPSCP ITRRFHALKD TRPVSEYMGA SPSVFVGSYG YPRVVGGPLM 
INDTDNPLDW VRQGFSIDDI VSVRSRTIRG GSDLDVKIPE IGKVQEIALS AKPLDVEVAF
EKPVSFDINF DGTVTPVGMS GAMKKLDVID NASVSRIVDR CTSDTDLKAT EAARIMFENG
TDVYKITNLL TAGLLGVNRR VVPTRWAITA TDDMISTSIK REVVKMPPLP EYQVFCGTLY
GNTICFILIP SNDWRFEMLE RWQKHSLWSG DEETIVVDGE KGLNKSKYSP IAGAYYSARL
AVLEYLKSIG RCARVLCIRD ISGEYWAPLG TWVIREAAHE SLSHPPDRVG TLGEAVTSAS
QKLGTGFWIP KMGLLKDIRQ QKTLFEF