Gene Mlab_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0530 
Symbol 
ID4795410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp503772 
End bp504665 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content55% 
IMG OID640099188 
Productdihydrodipicolinate synthase 
Protein accessionYP_001029971 
Protein GI124485355 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.4261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAG GTGTAATCCC TGCACTCATC ACACCGTTCA ATGACGACGC GTCCCAGTCG 
CTCGATATTG AAGGTCTGAG AAACTGCATC GAGTATGTCA TACGCGGAGG CGTTCACGGA
CTTCTCGCAT GCGGTTCGAC AGGAGAATCG GCAACAATGA CACACGCCGA GCACATTCGT
GTCATTGAGG AAACCGTTTC TGCTGCGAGC AACCGCATTC CTGCCATCGC AGGAACCGGT
TCGAACAATA CGGAAGAAGC TCTTCTGATG ACCCGTGCTG CAAAGATGTC CGGAGCAGAC
GGTGTACTTC TGATCAGCCC GTATTACAAC AAGCCGAACA GATCGGGTCT GCTGAAGCAT
TACCGCAAGG TCGCCGACAT CGGTCTTCCG GTCATTGTGT ACAACATCCC GGGACGTACC
GGTCAGAACC TGCCTGCCGA TCTGATCATC GAGATGGTGG AGACGATTCC AAATCTGGTC
GCCGTTAAGG AAGCCAGCGG AAATCTCGAC CAGATGATGG CGATCATCCA GGGCACCCAG
GATCTCGACC GCGAGTATCC GTTCATCCTT ACGTCAGGCG ACGACTCGCT GACGCTTCCG
GTCCTTTCGG TCGGCGGCCA CGGCTGTATT TCCGTTACGG CAAACATCGA GCCAAAGCGC
TTGGTCGAGA TGTACGATCT CTTTAGAAGA TCCGACGTCA AGGCGGCGAT GAAGAAGCAT
TACGAGCTGA TGGATCTGTC CAAGGCGCTC TTTATGGAAG TGAACCCGGT GCCGGTCAAG
CGTGCCGCAG AGATCCGCGG TCTGATCAAC TCAGGCAACG TCAGACTTCC ATTGGATTCG
CTTGGCGAGC AGAACACGGC GATCCTTCGC GGGGTGCTTT CCCGCTATGA TTAA
 
Protein sequence
MFEGVIPALI TPFNDDASQS LDIEGLRNCI EYVIRGGVHG LLACGSTGES ATMTHAEHIR 
VIEETVSAAS NRIPAIAGTG SNNTEEALLM TRAAKMSGAD GVLLISPYYN KPNRSGLLKH
YRKVADIGLP VIVYNIPGRT GQNLPADLII EMVETIPNLV AVKEASGNLD QMMAIIQGTQ
DLDREYPFIL TSGDDSLTLP VLSVGGHGCI SVTANIEPKR LVEMYDLFRR SDVKAAMKKH
YELMDLSKAL FMEVNPVPVK RAAEIRGLIN SGNVRLPLDS LGEQNTAILR GVLSRYD